diff --git a/README.Rmd b/README.Rmd index f27582c..f03b6b5 100644 --- a/README.Rmd +++ b/README.Rmd @@ -121,7 +121,7 @@ fba(mod) ## Notes -- *cobrar* exports SBML files level 3 version 2 with `fbc` version 3 and `groups` version 1. +- *cobrar* exports SBML files level 3 version 2 with `fbc` version 2 and `groups` version 1. - Group assignments are only supported for reactions. - GLPK is the default solver and is required to build the package. A plugin for IBM's ILOG CPLEX is available [here (cobrarCPLEX)](https://github.com/Waschina/cobrarCPLEX). - *Multiple objectives*. The SBML standard with its `fbc` extension allows to specify more than one objective (class `ListOfObjectives`). However, *cobrar* can only handle one current objective function per model, which is defined as an objective coefficient vector in slot `obj_coef` of an object of class `modelorg`. Note that when reading SBML models, *cobrar* will only use the objective, which is defined as `activeObjective` in the SBML file, or the first objective if no active objective is defined. diff --git a/README.md b/README.md index 4baadd9..b180b29 100644 --- a/README.md +++ b/README.md @@ -156,7 +156,7 @@ fba(mod) ## Notes -- *cobrar* exports SBML files level 3 version 2 with `fbc` version 3 and +- *cobrar* exports SBML files level 3 version 2 with `fbc` version 2 and `groups` version 1. - Group assignments are only supported for reactions. - GLPK is the default solver and is required to build the package. A