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models.py
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from __future__ import unicode_literals
from django.db import models
# Create your models here.
class Gene(models.Model):
'''gene model'''
gene_id = models.CharField(primary_key=True, max_length=32)
name = models.CharField(max_length=64)
nicknames = models.TextField(null=True)
definition = models.TextField(null=True)
organism_short = models.CharField(max_length=16)
organism = models.CharField(max_length=256)
position = models.CharField(max_length=16)
ntseq_length = models.IntegerField()
ntseq = models.TextField(null=True)
def __str__(self):
return self.name
class Meta:
'''internal class'''
managed = False
db_table = 'bio_gene'
class Paper_Gene(models.Model):
'''paper model'''
paper_id = models.CharField(max_length=32)
paper_title = models.CharField(max_length=255)
paper_keyword = models.CharField(max_length=255, default=None)
paper_abstract = models.TextField()
paper_link = models.CharField(max_length=255)
gene = models.ForeignKey(Gene, on_delete=models.CASCADE)
paper_class = models.IntegerField(default=-1)
def __str__(self):
return self.paper_id
class Meta:
managed = False
db_table = 'bio_paper_gene'
class One_KeySentence(models.Model):
'''keysentence model'''
gene_name_one = models.CharField(max_length=64)
gene_name_two = models.CharField(max_length=64)
paper = models.ForeignKey(Paper_Gene, on_delete=models.CASCADE)
sentence = models.TextField()
def __str__(self):
return self.gene_name_one
class Meta:
'''internal class'''
managed = False
db_table = 'bio_one_keysentence'
class Three_KeySentence(models.Model):
gene_name_one = models.CharField(max_length=64)
gene_name_two = models.CharField(max_length=64)
paper = models.ForeignKey(Paper_Gene, on_delete=models.CASCADE)
sentence = models.TextField()
def __str__(self):
return self.gene_name_one
class Meta:
'''internal class'''
managed = False
db_table = 'bio_three_keysentence'
class Gene_Disease(models.Model):
'''gene disease class'''
gene_name = models.CharField(max_length=64)
disease_name = models.CharField(max_length=64)
disease_class = models.CharField(max_length=64)
paper_id = models.IntegerField()
def __str__(self):
return self.gene_name
class Meta:
'''internal class'''
managed = False
db_table = 'bio_gene_disease'