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views.py
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# -*- coding:utf-8 -*-
from django.shortcuts import render
from projectManage.models import *
from accounts.models import *
# from django.core.urlresolvers import reverse
from django.http import HttpResponse, HttpResponseRedirect
from utils.functionTools.generalFunction import noneIfEmptyString,noneIfNoKey,myError
from .search_relation import search_relation, search_genes, search_papers, search_one_sentence, search_three_sentence, search_related_disease
from system.gene import get_gene_info
import json
import string
import random
# Create your views here.
def randomGene(request):
try:
body = request.body
body = body.decode('utf-8')
data = json.loads(body)
gene_file = open('data/gene_name.json', 'r')
gene_list = json.loads(gene_file.read())
gene_name = random.choice(gene_list)
search_result = search_relation(gene_name)
if len(search_result['children']) > 10:
search_result['children'].sort(key=lambda d:float(d['relations']), reverse=True)
search_result['children'] = search_result['children'][:10]
for gene in search_result['children']:
gene_name = gene['name']
temp_result = search_relation(gene_name)
if len(temp_result['children']) > 10:
temp_result['children'].sort(key=lambda d:float(d['relations']), reverse=True)
gene['children'] = temp_result['children'][:10]
else:
gene['children'] = temp_result['children']
result = {
'successful': True,
'data': search_result,
'error': {
'id': '',
'msg': '',
},
}
except myError as e:
print(e.value)
result = {
'successful': False,
'error': {
'id': '3',
'msg': e.value,
}
}
except Exception as e:
print(e.args)
result = {
'successful': False,
'error': {
'id': '1024',
'msg': e.args
}
}
finally:
return HttpResponse(json.dumps(result), content_type='application/json')
def searchGenes(request):
try:
body = request.body
body = body.decode('utf-8')
data = json.loads(body)
keyword = data['keyword']
search_result = search_genes(keyword)
result = {
'successful': True,
'data': search_result,
'error': {
'id': '',
'msg': '',
},
}
except myError as e:
result = {
'successful': False,
'error': {
'id': '3',
'msg': e.value,
}
}
except Exception as e:
result = {
'successful': False,
'error': {
'id': '1024',
'msg': e.args
}
}
finally:
return HttpResponse(json.dumps(result), content_type='application/json')
def getGeneInfo(request):
try:
body = request.body
body = body.decode('utf-8')
data = json.loads(body)
gene_name = data['gene_name']
gene = Gene.objects.filter(name=gene_name).first()
gene_id = gene.gene_id
get_result = get_gene_info(gene_id)
result = {
'successful': get_result[0],
'data': get_result[1],
'error': {
'id': '',
'msg': '',
},
}
except myError as e:
result = {
'successful': False,
'error': {
'id': '3',
'msg': e.value,
}
}
except Exception as e:
result = {
'successful': False,
'error': {
'id': '1024',
'msg': e.args
}
}
finally:
return HttpResponse(json.dumps(result), content_type='application/json')
def getRelatedGene(request):
try:
body = request.body
body = body.decode('utf-8')
data = json.loads(body)
gene_name = data['gene_name']
realated_gene_list = []
realated_genes = search_relation(gene_name)
if realated_genes:
if len(realated_genes['children']) > 10:
print(realated_genes)
realated_genes['children'].sort(key=lambda d:float(d['relations']), reverse=True)
realated_genes['children'] = realated_genes['children'][:10]
print(realated_genes)
else:
realated_genes['main_gene'] = gene_name
realated_genes['children'] = list()
result = {
'successful': True,
'data': realated_genes,
'error': {
'id': '',
'msg': '',
},
}
except myError as e:
result = {
'successful': False,
'error': {
'id': '3',
'msg': e.value,
}
}
except Exception as e:
result = {
'successful': False,
'error': {
'id': '1024',
'msg': e.args
}
}
finally:
return HttpResponse(json.dumps(result), content_type='application/json')
def getRelatedPaper(request):
try:
body = request.body
body = body.decode('utf-8')
data = json.loads(body)
gene_name = data['gene_name']
related_paper_list = search_papers(gene_name)
result = {
'successful': True,
'data': related_paper_list,
'error': {
'id': '',
'msg': '',
},
}
except myError as e:
result = {
'successful': False,
'error': {
'id': '3',
'msg': e.value,
}
}
except Exception as e:
result = {
'successful': False,
'error': {
'id': '1024',
'msg': e.args
}
}
finally:
return HttpResponse(json.dumps(result), content_type='application/json')
def getOneSentence(request):
try:
body = request.body
body = body.decode('utf-8')
data = json.loads(body)
gene_name_one = data['source_name']
gene_name_two = data['target_name']
sentenceList = search_one_sentence(gene_name_one,gene_name_two)
result = {
'successful': True,
'data': sentenceList,
'error': {
'id': '',
'msg': '',
},
}
except myError as e:
result = {
'successful': False,
'error': {
'id': '3',
'msg': e.value,
}
}
except Exception as e:
result = {
'successful': False,
'error': {
'id': '1024',
'msg': e.args
}
}
finally:
return HttpResponse(json.dumps(result), content_type='application/json')
def getThreeSentences(request):
try:
body = request.body
body = body.decode('utf-8')
data = json.loads(body)
gene_name_one = data['source_name']
gene_name_two = data['target_name']
sentenceList = search_three_sentence(gene_name_one,gene_name_two)
result = {
'successful': True,
'data': sentenceList,
'error': {
'id': '',
'msg': '',
},
}
except myError as e:
result = {
'successful': False,
'error': {
'id': '3',
'msg': e.value,
}
}
except Exception as e:
result = {
'successful': False,
'error': {
'id': '1024',
'msg': e.args
}
}
finally:
return HttpResponse(json.dumps(result), content_type='application/json')
def getRelatedDisease(request):
try:
body = request.body
body = body.decode('utf-8')
data = json.loads(body)
gene_name = data['gene_name']
realated_disease_list = search_related_disease(gene_name)
result = {
'successful': True,
'data': realated_disease_list,
'error': {
'id': '',
'msg': '',
},
}
except myError as e:
result = {
'successful': False,
'error': {
'id': '3',
'msg': e.value,
}
}
except Exception as e:
result = {
'successful': False,
'error': {
'id': '1024',
'msg': e.args
}
}
finally:
return HttpResponse(json.dumps(result), content_type='application/json')