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Add download options #515

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rannick opened this issue Nov 12, 2024 · 7 comments
Open

Add download options #515

rannick opened this issue Nov 12, 2024 · 7 comments
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@rannick
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rannick commented Nov 12, 2024

Description of feature

For fusioncatcher and starfusion, reduce building time and issues by having pre-built indexes on sourceforge

@nschcolnicov nschcolnicov self-assigned this Nov 20, 2024
@apeltzer
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We will discuss with @nf-core/core if its a possibility to have the entire nf-core/rnafusion indices apart from the fusion-report (cosmic licence required atm) being added to the nf-core S3 bucket. We do this for some pipelines already, if people from core could give me a thumbs up / down / comment that would be appreciated 👍🏻

@apeltzer
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References are uploaded to S3 Bucket from nf-core - @maxulysse should have the files by now :)

@rannick
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rannick commented Dec 19, 2024

For 3.0.2 i.e. ensembl 102? Or the ones I put on source forge

@rannick
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rannick commented Dec 19, 2024

STARfusion references are due for an update very soon as well

@rannick
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rannick commented Dec 19, 2024

Could I ask where the files would be?

@apeltzer
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@maxulysse help

@apeltzer
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(He's on vacation I think now...)

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