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odl.tomo.backends.skimage_randon.skimage_radon_back_projector not compatible with skimage==0.19 #1618

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Yao1993 opened this issue Apr 26, 2022 · 0 comments

Yao1993 commented Apr 26, 2022

odl/odl/tomo/backends/skimage_radon.py

Lines 155 to 162 in d30f57d

    
           # Rotate back from (rows, cols) to (x, y), then back-project (no filter) 
        
           backproj = iradon( 
        
               skimage_sinogram.asarray().T, 
        
               theta, 
        
               output_size=vol_space.shape[0], 
        
               filter=None, 
        
               circle=False, 
        
           )

The function skimage_radon_back_projector call iradon whith the keyword argument filter, but this argument is removed since skimage v0.19.

@deprecate_kwarg(kwarg_mapping={'filter': 'filter_name'},
                 removed_version="0.19")
def iradon(radon_image, theta=None, output_size=None,
           filter_name="ramp", interpolation="linear", circle=True):

https://github.com/scikit-image/scikit-image/blob/26cb086a6d829aa4d17b10831be5bcde3c359925/skimage/transform/radon_transform.py#L192-L195

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