_site.yml

name: "reproducible-science-workshop"
title: "Reproducible science workshop"
description: "A one-day workshop with R and RStudio"
output_dir: "docs"
theme: "theme.css"
#repository_url: https://github.com/wilkelab/SDS375
include: [".nojekyll"]
navbar:
#  logo:
#    image: images/cefe.png
#    href: https://www.cefe.cnrs.fr/en/
  source_url: true
  left:
  right:
    - text: "Home"
      href: index.html
    - text: "Slides"
      menu:
        - text: "Motivations"
          href: slides/0_introduction.html
        - text: "Part 1: Manipulating data"
          href: slides/3_dplyr.html
        - text: "Part 2: Visualising data"
          href: slides/4_ggplot.html
        - text: "Part 3: Writing reproducible documents"
          href: slides/2_markdown.html
        - text: "Part 4: Versioning"
          href: slides/1_github.html
        - text: "Take-home messages"
          href: slides/5_conclusion.html
    - text: "Worksheets"
      menu:
        - text: "Practical 1: Manipulating data"
          href: practicals/1_datamanipulation.html
        - text: "Practical 1: Manipulating data - Solutions"
          href: practicals/1_datamanipulation_solution.html
        - text: "Practical 2: Visualizing data"
          href: practicals/2_datavisualisation.html
        - text: "Practical 2: Visualizing data - Solutions"
          href: practicals/2_datavisualisation_solution.html
        - text: "Practical 3: Writing reproducible documents"
          href: practicals/3_rmarkdown.html
        - text: "Practical 3: Writing reproducible documents - Solutions"
          href: practicals/3_rmarkdownsolution.Rmd
        - text: "Practical 3: Writing reproducible documents - Html output"
          href: practicals/3_rmarkdownsolution.html
        - text: "Practical 3: Writing reproducible documents - PDF output"
          href: practicals/3_rmarkdownsolution.pdf
        - text: "Practical 3: Writing reproducible documents - Word output"
          href: practicals/3_rmarkdownsolution.docx
        - text: "Practical 4: Version control"
          href: practicals/4_versioncontrol.html
    - icon: fab fa-github
      href: https://github.com/oliviergimenez/reproducible-science-workshop
output: distill::distill_article