From db2a62c976b91a96d8d796ff752740dc27db7a9f Mon Sep 17 00:00:00 2001 From: Erik Garrison Date: Mon, 10 Oct 2022 23:42:52 -0400 Subject: [PATCH 1/2] update wfmash and seqwish --- Dockerfile | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/Dockerfile b/Dockerfile index 4b8bf36..9de4d0c 100644 --- a/Dockerfile +++ b/Dockerfile @@ -44,7 +44,7 @@ RUN apt-get update \ RUN git clone --recursive https://github.com/waveygang/wfmash \ && cd wfmash \ && git pull \ - && git checkout a8e4daae6c0e61c898a799d34bb91c16655d268d \ + && git checkout e7ab130028ddafb587c29c302ec62cfb63a8569e \ && git submodule update --init --recursive \ && sed -i 's/-march=native//g' src/common/wflign/deps/WFA2-lib/Makefile \ && cmake -H. -DCMAKE_BUILD_TYPE=Generic -Bbuild && cmake --build build -- -j $(nproc) \ @@ -55,7 +55,7 @@ RUN git clone --recursive https://github.com/waveygang/wfmash \ RUN git clone --recursive https://github.com/ekg/seqwish \ && cd seqwish \ && git pull \ - && git checkout da0d2f0d81f1a3214ed34e2174bae73a0ea39296 \ + && git checkout bea906eb37b6029f144da79dd1d807dd4fee8edf \ && git submodule update --init --recursive \ && cmake -H. -DCMAKE_BUILD_TYPE=Generic -Bbuild && cmake --build build -- -j $(nproc) \ && cp bin/seqwish /usr/local/bin/seqwish \ From a8e729aef002afad905294a2021e5a49d5bd1708 Mon Sep 17 00:00:00 2001 From: Erik Garrison Date: Tue, 11 Oct 2022 00:09:30 -0400 Subject: [PATCH 2/2] okay just wfmash --- Dockerfile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/Dockerfile b/Dockerfile index 9de4d0c..a64b8a5 100644 --- a/Dockerfile +++ b/Dockerfile @@ -55,7 +55,7 @@ RUN git clone --recursive https://github.com/waveygang/wfmash \ RUN git clone --recursive https://github.com/ekg/seqwish \ && cd seqwish \ && git pull \ - && git checkout bea906eb37b6029f144da79dd1d807dd4fee8edf \ + && git checkout da0d2f0d81f1a3214ed34e2174bae73a0ea39296 \ && git submodule update --init --recursive \ && cmake -H. -DCMAKE_BUILD_TYPE=Generic -Bbuild && cmake --build build -- -j $(nproc) \ && cp bin/seqwish /usr/local/bin/seqwish \