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python_environment.yml
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name: gtex-env
channels:
- bioconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- alabaster=0.7.12=py_0
- appdirs=1.4.3=py_1
- attrs=19.3.0=py_0
- babel=2.7.0=py_0
- backcall=0.1.0=py37_0
- beautifulsoup4=4.8.1=py37_0
- bioservices=1.6.0=py_1
- blas=1.0=mkl
- bleach=3.1.0=py37_0
- ca-certificates=2020.4.5.1=hecc5488_0
- certifi=2020.4.5.1=py37hc8dfbb8_0
- cffi=1.13.2=py37h8022711_0
- chardet=3.0.4=py37_1003
- colorama=0.4.1=py_0
- colorlog=4.0.2=py37_1000
- cryptography=2.8=py37h72c5cf5_1
- cycler=0.10.0=py37_0
- dbus=1.13.12=h746ee38_0
- decorator=4.4.1=py_0
- defusedxml=0.6.0=py_0
- docutils=0.15.2=py37_0
- easydev=0.9.38=py_0
- entrypoints=0.3=py37_0
- expat=2.2.6=he6710b0_0
- fontconfig=2.13.0=h9420a91_0
- freetype=2.9.1=h8a8886c_1
- gevent=1.4.0=py37h516909a_0
- glib=2.63.1=h5a9c865_0
- gmp=6.1.2=h6c8ec71_1
- greenlet=0.4.15=py37h516909a_0
- grequests=0.4.0=py_0
- gseapy=0.9.16=py_0
- gst-plugins-base=1.14.0=hbbd80ab_1
- gstreamer=1.14.0=hb453b48_1
- html5lib=1.0.1=py_0
- icu=58.2=h9c2bf20_1
- idna=2.8=py37_1000
- imagesize=1.1.0=py_0
- importlib_metadata=0.23=py37_0
- intel-openmp=2019.4=243
- ipykernel=5.1.3=py37h39e3cac_0
- ipython=7.9.0=py37h39e3cac_0
- ipython_genutils=0.2.0=py37_0
- jedi=0.15.1=py37_0
- jinja2=2.10.3=py_0
- joblib=0.14.0=py_0
- jpeg=9b=h024ee3a_2
- json5=0.8.5=py_0
- jsonschema=3.1.1=py37_0
- jupyter_client=5.3.4=py37_0
- jupyter_core=4.6.1=py37_0
- jupyterlab=1.1.4=pyhf63ae98_0
- jupyterlab_server=1.0.6=py_0
- kiwisolver=1.1.0=py37he6710b0_0
- libedit=3.1.20181209=hc058e9b_0
- libffi=3.2.1=hd88cf55_4
- libgcc-ng=9.1.0=hdf63c60_0
- libgfortran-ng=7.3.0=hdf63c60_0
- libllvm8=8.0.1=hc9558a2_0
- libpng=1.6.37=hbc83047_0
- libsodium=1.0.16=h1bed415_0
- libstdcxx-ng=9.1.0=hdf63c60_0
- libuuid=1.0.3=h1bed415_2
- libxcb=1.13=h1bed415_1
- libxml2=2.9.9=hea5a465_1
- libxslt=1.1.33=h7d1a2b0_0
- llvmlite=0.31.0=py37h5202443_1
- lxml=4.4.2=py37hefd8a0e_0
- markupsafe=1.1.1=py37h7b6447c_0
- matplotlib=3.1.0=py37h5429711_0
- mistune=0.8.4=py37h7b6447c_0
- mkl=2019.4=243
- mkl-service=2.3.0=py37he904b0f_0
- mkl_fft=1.0.15=py37ha843d7b_0
- mkl_random=1.1.0=py37hd6b4f25_0
- more-itertools=7.2.0=py37_0
- nbconvert=5.6.1=py37_0
- nbformat=4.4.0=py37_0
- ncurses=6.1=he6710b0_1
- networkx=2.4=py_0
- notebook=6.0.1=py37_0
- numba=0.48.0=py37hb3f55d8_0
- numpy=1.17.3=py37hd14ec0e_0
- numpy-base=1.17.3=py37hde5b4d6_0
- numpydoc=0.9.1=py_0
- openssl=1.1.1g=h516909a_0
- packaging=19.2=py_0
- pandas=1.0.1=py37h0573a6f_0
- pandoc=2.2.3.2=0
- pandocfilters=1.4.2=py37_1
- parso=0.5.1=py_0
- patsy=0.5.1=py_0
- pcre=8.43=he6710b0_0
- pexpect=4.7.0=py37_0
- pickleshare=0.7.5=py37_0
- pip=19.3.1=py37_0
- prometheus_client=0.7.1=py_0
- prompt_toolkit=2.0.10=py_0
- ptyprocess=0.6.0=py37_0
- pycparser=2.19=py37_1
- pygments=2.4.2=py_0
- pyopenssl=19.1.0=py37_0
- pyparsing=2.4.2=py_0
- pyqt=5.9.2=py37h05f1152_2
- pyrsistent=0.15.4=py37h7b6447c_0
- pysocks=1.7.1=py37_0
- python=3.7.5=h0371630_0
- python-dateutil=2.8.0=py37_0
- python_abi=3.7=1_cp37m
- pytz=2019.3=py_0
- pyzmq=18.1.0=py37he6710b0_0
- qt=5.9.7=h5867ecd_1
- readline=7.0=h7b6447c_5
- requests=2.22.0=py37_1
- requests-cache=0.5.0=py_0
- scikit-learn=0.21.3=py37hd81dba3_0
- send2trash=1.5.0=py37_0
- setuptools=41.6.0=py37_0
- sip=4.19.8=py37hf484d3e_0
- six=1.12.0=py37_0
- snowballstemmer=2.0.0=py_0
- soupsieve=1.9.4=py37_0
- sphinx=2.2.2=py_0
- sphinxcontrib-applehelp=1.0.1=py_0
- sphinxcontrib-devhelp=1.0.1=py_0
- sphinxcontrib-htmlhelp=1.0.2=py_0
- sphinxcontrib-jsmath=1.0.1=py_0
- sphinxcontrib-qthelp=1.0.2=py_0
- sphinxcontrib-serializinghtml=1.1.3=py_0
- sqlite=3.30.1=h7b6447c_0
- statsmodels=0.10.2=py37hc1659b7_0
- suds-jurko=0.6=py37_1001
- tbb=2020.1=hc9558a2_0
- terminado=0.8.2=py37_0
- testpath=0.4.2=py37_0
- tk=8.6.8=hbc83047_0
- tornado=6.0.3=py37h7b6447c_0
- traitlets=4.3.3=py37_0
- umap-learn=0.4.2=py37hc8dfbb8_0
- urllib3=1.25.7=py37_0
- wcwidth=0.1.7=py37_0
- webencodings=0.5.1=py37_1
- wheel=0.33.6=py37_0
- wrapt=1.11.2=py37h516909a_0
- xz=5.2.4=h14c3975_4
- zeromq=4.3.1=he6710b0_3
- zipp=0.6.0=py_0
- zlib=1.2.11=h7b6447c_3
- pip:
- bctpy==0.5.0
- scipy==1.3.1