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Added more logic to filter, created FilterDialog.tsx
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,84 @@ | ||
| import { FC, useState } from 'react' | ||
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|
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| import { ListItemText, ListSubheader, Switch } from '@mui/material' | ||
| import Box from '@mui/material/Box' | ||
| import List from '@mui/material/List' | ||
| import ListItem from '@mui/material/ListItem' | ||
|
|
||
| export const FilterDialog: FC = () => { | ||
| const [EPPICorrValue, setEPPICorrValue] = useState<number>() | ||
| const [PPPICorrValue, setPPPICorrValue] = useState<number>() | ||
| const [PPPIConfValue, setPPPIConfValue] = useState<number>() | ||
| const [PPDIConfValue, setPPDIConfValue] = useState<number>() | ||
| const selectors = { | ||
| EPPISelector: '[type = "PPI"][method = "E"]', // checkbox | ||
| corrSelector: '[correlation <= ', // eppi-correlation spinner + checkbox | ||
| PPPISelector: '[type = "PPI"][method = "P"]', // checkbox | ||
| interConfSelector: '[interolog_conf <=', // PPPI correlation | ||
| EPDISelector: '[type = "PDI"][method = "E"]', | ||
| PPDISelector: '[type = "PDI"][method = "P"]', | ||
| fimoConfSelector: '[fimo_conf >= ', | ||
| } | ||
|
|
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| const applyFilters = () => { | ||
| // Create selectors | ||
| const eppiCorr = | ||
| selectors.EPPISelector + selectors.corrSelector + EPPICorrValue + ']' | ||
| const pppiCorr = | ||
| selectors.PPPISelector + selectors.corrSelector + PPPICorrValue + ']' | ||
| const pppiConf = | ||
| selectors.PPPISelector + selectors.interConfSelector + PPPIConfValue + ']' | ||
| const ppdiConf = | ||
| selectors.PPDISelector + selectors.fimoConfSelector + PPDIConfValue + ']' | ||
| } | ||
|
|
||
| return ( | ||
| <Box> | ||
| <List | ||
| sx={(theme) => ({ | ||
| maxWidth: 360, | ||
| bgcolor: theme.palette.background.default, | ||
| })} | ||
| subheader={<ListSubheader>Filter Interactions</ListSubheader>} | ||
| > | ||
| <ListItem> | ||
| <ListItemText | ||
| id='filter-option-1' | ||
| primary='Hide ALL experimentally determined Protein-Protein interactions' | ||
| /> | ||
| <Switch edge='end' onChange={() => {}} checked={false} /> | ||
| </ListItem> | ||
| <ListItem> | ||
| <ListItemText | ||
| id='filter-option-2' | ||
| primary='Hide only with correlation less than: 0.5 ' | ||
| /> | ||
| <Switch edge='end' onChange={() => {}} checked={false} /> | ||
| </ListItem> | ||
| <ListItem> | ||
| <ListItemText | ||
| id='filter-option-3' | ||
| primary='Hide ALL predicted | ||
| Protein-Protein interactions Hide only with correlation less than: | ||
| 0.5' | ||
| /> | ||
| <Switch edge='end' onChange={() => {}} checked={false} /> | ||
| </ListItem> | ||
| <ListItem> | ||
| <ListItemText | ||
| id='filter-option-4' | ||
| primary='Hide only with confidence less than 2' | ||
| /> | ||
| <Switch edge='end' onChange={() => {}} checked={false} /> | ||
| </ListItem> | ||
| <ListItem> | ||
| <ListItemText | ||
| id='filter-option-5' | ||
| primary='Hide only with confidence less than 2' | ||
| /> | ||
| <Switch edge='end' onChange={() => {}} checked={false} /> | ||
| </ListItem> | ||
| </List> | ||
| </Box> | ||
| ) | ||
| } |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,176 @@ | ||
| const styles: any = [ | ||
| { | ||
| selector: 'node', | ||
| style: { | ||
| 'text-background-shape': 'roundrectangle', | ||
| 'text-background-color': 'white', | ||
| 'text-background-opacity': 0.9, | ||
| 'background-color': '#f4f4f4', | ||
| 'font-size': '11px', | ||
| //'font-weight': 'bold', | ||
| 'text-halign': 'center', | ||
| 'border-width': '0px', | ||
| //'width': 'auto', | ||
| 'text-background-padding': '2px', | ||
| }, | ||
| }, | ||
| { | ||
| selector: '.compound-top', | ||
| style: { | ||
| shape: 'roundrectangle', | ||
| 'background-color': '#F3F3F3', | ||
| 'text-background-color': 'white', | ||
| 'text-wrap': 'wrap', | ||
| width: '300px', | ||
| color: '#000', | ||
| 'font-size': '10px', | ||
| 'font-weight': 'bold', | ||
| 'text-outline-width': '0px', | ||
| 'text-valign': 'top', | ||
| }, | ||
| }, | ||
| { | ||
| selector: '#COMPOUND_DNA', | ||
| style: { | ||
| 'background-opacity': '0', | ||
| 'text-background-opacity': '1', | ||
| label: 'Protein-DNA\nInteractions', | ||
| }, | ||
| }, | ||
| { | ||
| selector: '#COMPOUND_PROTEIN', | ||
| style: { | ||
| 'background-opacity': '0', | ||
| 'text-background-opacity': '1', | ||
| label: 'Protein-Protein\nInteractions', | ||
| }, | ||
| }, | ||
| { | ||
| selector: '.protein-compound', | ||
| style: { | ||
| 'background-opacity': 0, | ||
| events: 'no', | ||
| }, | ||
| }, | ||
| { | ||
| selector: '.protein-back[borderWidth]', | ||
| style: { | ||
| height: 'data(height)', | ||
| width: 'data(width)', | ||
| 'pie-size': '100%', | ||
| 'pie-1-background-color': 'data(pie1Colour)', | ||
| 'pie-1-background-size': 'data(pie1Size)', | ||
| 'pie-1-background-opacity': 1, | ||
| 'pie-2-background-color': 'data(pie2Colour)', | ||
| 'pie-2-background-size': 'data(pie2Size)', | ||
| 'pie-2-background-opacity': 1, | ||
| 'pie-3-background-color': 'data(pie3Colour)', | ||
| 'pie-3-background-size': 'data(pie3Size)', | ||
| 'pie-3-background-opacity': 1, | ||
| 'pie-4-background-color': 'data(pie4Colour)', | ||
| 'pie-4-background-size': 'data(pie4Size)', | ||
| 'pie-4-background-opacity': 1, | ||
| 'border-width': 'data(borderWidth)', | ||
| 'border-color': '#99CC00', | ||
| events: 'no', | ||
| }, | ||
| }, | ||
| { | ||
| selector: '.protein-node', | ||
| style: { | ||
| height: '36px', | ||
| width: '36px', | ||
| padding: '3px 3px 3px 3px', | ||
| 'text-valign': 'center', | ||
| content: 'data(content)', | ||
| events: 'yes', | ||
| 'z-index': 10, | ||
| }, | ||
| }, | ||
| { | ||
| selector: '[id $= "QUERY_BACK"]', | ||
| style: { | ||
| height: '60px', | ||
| width: '60px', | ||
| }, | ||
| }, | ||
| { | ||
| selector: '[id $= "QUERY_NODE"]', | ||
| style: { | ||
| height: '48px', | ||
| width: '48px', | ||
| 'font-size': '11px', | ||
| 'z-index': 10000000, | ||
| }, | ||
| }, | ||
| { | ||
| selector: '.dna-node', | ||
| style: { | ||
| shape: 'square', | ||
| width: '34px', | ||
| height: '34px', | ||
| 'border-width': '4px', | ||
| padding: '3px 3px 3px 3px', | ||
| 'border-color': '#030303', | ||
| 'text-valign': 'center', | ||
| content: 'data(content)', | ||
| 'z-index': 10, | ||
| }, | ||
| }, | ||
| { | ||
| selector: 'edge', | ||
| style: { | ||
| width: 'data(size)', | ||
| 'line-style': 'data(lineStyle)', | ||
| 'line-color': 'data(lineColor)', | ||
| 'control-point-distance': '50px', | ||
| 'control-point-weight': '0.5', | ||
| }, | ||
| }, | ||
| { | ||
| selector: '.protein-edge', | ||
| style: { | ||
| 'curve-style': 'bezier', | ||
| 'mid-target-arrow-shape': 'none', | ||
| }, | ||
| }, | ||
| { | ||
| selector: '.dna-edge', | ||
| style: { | ||
| 'curve-style': 'unbundled-bezier', | ||
| 'mid-target-arrow-shape': 'triangle', | ||
| 'mid-target-arrow-color': 'data(lineColor)', | ||
| }, | ||
| }, | ||
| { | ||
| selector: '.chr-edge', | ||
| style: { | ||
| 'curve-style': 'unbundled-bezier', | ||
| 'mid-target-arrow-shape': 'triangle', | ||
| 'mid-target-arrow-color': 'data(arrowColor)', | ||
| 'control-point-distance': '50px', | ||
| 'control-point-weight': '0.5', | ||
| }, | ||
| }, | ||
| { | ||
| selector: '.loaded', | ||
| style: { | ||
| 'background-color': '#3C3C3C', | ||
| 'text-background-color': '#3C3C3C', | ||
| color: '#FFFFFF', | ||
| }, | ||
| }, | ||
| { | ||
| selector: '#noInteractionLabel', | ||
| style: { | ||
| shape: 'circle', | ||
| content: 'No interactions found for this gene.', | ||
| width: '1px', | ||
| height: '1px', | ||
| color: '#000', | ||
| 'text-background-opacity': '0', | ||
| 'font-size': 15, | ||
| }, | ||
| }, | ||
| ] | ||
| export default styles |
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