New class structure and names, and example #12
Workflow file for this run
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name: Countoscope Unit Tests | |
on: | |
# Run the workflow on pushes to the 'develop' branch and pull requests targeting 'develop' | |
push: | |
branches: [ develop ] | |
pull_request: | |
branches: [ develop ] | |
jobs: | |
# Specify the OS environment (Ubuntu) for the GitHub runner | |
build: | |
runs-on: ubuntu-latest | |
steps: | |
# Step 1: Checkout the repository, including submodules and any LFS-managed files | |
- uses: actions/checkout@v2 | |
with: | |
submodules: true | |
lfs: true | |
# Step 2: Set up Python 3.10.7 | |
- name: Set up Python 3.10.7 | |
uses: actions/setup-python@v2 | |
with: | |
python-version: "3.10.7" | |
# Step 3: Update pip, Install dependencies, Install the Countoscope | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
pip install -r requirements.txt | |
pip install . | |
# Step 4: Run tests using pytest | |
- name: Test with pytest | |
run: | | |
cd tests | |
pip install -r requirements.txt | |
pytest . |