Skip to content

Commit

Permalink
Make install
Browse files Browse the repository at this point in the history
  • Loading branch information
@davidmeunier79
davidmeunier79 committed May 13, 2022
1 parent 49ec6db commit 5708e31
Show file tree
Hide file tree
Showing 83 changed files with 240 additions and 324 deletions.
Binary file modified _downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip
View file
Binary file not shown.
Binary file modified _downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip
View file
Binary file not shown.
6 changes: 3 additions & 3 deletions _modules/index.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>Overview: module code &#8212; macapype 0.3.0.2 documentation</title>
<title>Overview: module code &#8212; macapype 0.3.1 documentation</title>
<link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="../_static/bootstrap-sphinx.css" />
<link rel="stylesheet" type="text/css" href="../_static/sg_gallery.css" />
Expand Down Expand Up @@ -39,7 +39,7 @@
</button>
<a class="navbar-brand" href="../index.html"><span><img src="../_static/logo_macapype_0.3.jpg"></span>
Macapype</a>
<span class="navbar-text navbar-version pull-left"><b>0.3.0.2</b></span>
<span class="navbar-text navbar-version pull-left"><b>0.3.1</b></span>
</div>

<div class="collapse navbar-collapse nav-collapse">
Expand Down Expand Up @@ -294,7 +294,7 @@ <h1>All modules for which code is available</h1>

</p>
<p>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-12.<br/>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-13.<br/>
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 4.3.1.<br/>
</p>
</div>
Expand Down
12 changes: 3 additions & 9 deletions _modules/macapype/nodes/correct_bias.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>macapype.nodes.correct_bias &#8212; macapype 0.3.0.2 documentation</title>
<title>macapype.nodes.correct_bias &#8212; macapype 0.3.1 documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/bootstrap-sphinx.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/sg_gallery.css" />
Expand Down Expand Up @@ -39,7 +39,7 @@
</button>
<a class="navbar-brand" href="../../../index.html"><span><img src="../../../_static/logo_macapype_0.3.jpg"></span>
Macapype</a>
<span class="navbar-text navbar-version pull-left"><b>0.3.0.2</b></span>
<span class="navbar-text navbar-version pull-left"><b>0.3.1</b></span>
</div>

<div class="collapse navbar-collapse nav-collapse">
Expand Down Expand Up @@ -93,12 +93,6 @@
<li class="toctree-l1"><a class="reference internal" href="../../../params.html">Parameters</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../indiv_params.html">Individual Parameters</a><ul>
<li class="toctree-l2"><a class="reference internal" href="../../../indiv_params.html#adding-indiv">Adding -indiv</a></li>
<li class="toctree-l2"><a class="reference internal" href="../../../indiv_params.html#list-of-indiv-params-recap">List of indiv params (recap):</a><ul>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#data-preparation-ants-ants-t1-spm-spm-t1">Data preparation (ANTS, ANTS_T1, SPM, SPM_T1)</a></li>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#spm-based-pipelines-spm-and-spm-t1">SPM based pipelines (SPM and SPM_T1)</a></li>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#ants-based-pipelines">ANTS based pipelines</a></li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="../../../tutorial.html">Tutorial</a><ul>
Expand Down Expand Up @@ -505,7 +499,7 @@ <h1>Source code for macapype.nodes.correct_bias</h1><div class="highlight"><pre>

</p>
<p>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-12.<br/>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-13.<br/>
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 4.3.1.<br/>
</p>
</div>
Expand Down
12 changes: 3 additions & 9 deletions _modules/macapype/nodes/extract_brain.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>macapype.nodes.extract_brain &#8212; macapype 0.3.0.2 documentation</title>
<title>macapype.nodes.extract_brain &#8212; macapype 0.3.1 documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/bootstrap-sphinx.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/sg_gallery.css" />
Expand Down Expand Up @@ -39,7 +39,7 @@
</button>
<a class="navbar-brand" href="../../../index.html"><span><img src="../../../_static/logo_macapype_0.3.jpg"></span>
Macapype</a>
<span class="navbar-text navbar-version pull-left"><b>0.3.0.2</b></span>
<span class="navbar-text navbar-version pull-left"><b>0.3.1</b></span>
</div>

<div class="collapse navbar-collapse nav-collapse">
Expand Down Expand Up @@ -93,12 +93,6 @@
<li class="toctree-l1"><a class="reference internal" href="../../../params.html">Parameters</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../indiv_params.html">Individual Parameters</a><ul>
<li class="toctree-l2"><a class="reference internal" href="../../../indiv_params.html#adding-indiv">Adding -indiv</a></li>
<li class="toctree-l2"><a class="reference internal" href="../../../indiv_params.html#list-of-indiv-params-recap">List of indiv params (recap):</a><ul>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#data-preparation-ants-ants-t1-spm-spm-t1">Data preparation (ANTS, ANTS_T1, SPM, SPM_T1)</a></li>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#spm-based-pipelines-spm-and-spm-t1">SPM based pipelines (SPM and SPM_T1)</a></li>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#ants-based-pipelines">ANTS based pipelines</a></li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="../../../tutorial.html">Tutorial</a><ul>
Expand Down Expand Up @@ -687,7 +681,7 @@ <h1>Source code for macapype.nodes.extract_brain</h1><div class="highlight"><pre

</p>
<p>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-12.<br/>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-13.<br/>
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 4.3.1.<br/>
</p>
</div>
Expand Down
12 changes: 3 additions & 9 deletions _modules/macapype/nodes/prepare.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>macapype.nodes.prepare &#8212; macapype 0.3.0.2 documentation</title>
<title>macapype.nodes.prepare &#8212; macapype 0.3.1 documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/bootstrap-sphinx.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/sg_gallery.css" />
Expand Down Expand Up @@ -39,7 +39,7 @@
</button>
<a class="navbar-brand" href="../../../index.html"><span><img src="../../../_static/logo_macapype_0.3.jpg"></span>
Macapype</a>
<span class="navbar-text navbar-version pull-left"><b>0.3.0.2</b></span>
<span class="navbar-text navbar-version pull-left"><b>0.3.1</b></span>
</div>

<div class="collapse navbar-collapse nav-collapse">
Expand Down Expand Up @@ -93,12 +93,6 @@
<li class="toctree-l1"><a class="reference internal" href="../../../params.html">Parameters</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../indiv_params.html">Individual Parameters</a><ul>
<li class="toctree-l2"><a class="reference internal" href="../../../indiv_params.html#adding-indiv">Adding -indiv</a></li>
<li class="toctree-l2"><a class="reference internal" href="../../../indiv_params.html#list-of-indiv-params-recap">List of indiv params (recap):</a><ul>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#data-preparation-ants-ants-t1-spm-spm-t1">Data preparation (ANTS, ANTS_T1, SPM, SPM_T1)</a></li>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#spm-based-pipelines-spm-and-spm-t1">SPM based pipelines (SPM and SPM_T1)</a></li>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#ants-based-pipelines">ANTS based pipelines</a></li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="../../../tutorial.html">Tutorial</a><ul>
Expand Down Expand Up @@ -599,7 +593,7 @@ <h1>Source code for macapype.nodes.prepare</h1><div class="highlight"><pre>

</p>
<p>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-12.<br/>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-13.<br/>
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 4.3.1.<br/>
</p>
</div>
Expand Down
12 changes: 3 additions & 9 deletions _modules/macapype/nodes/register.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>macapype.nodes.register &#8212; macapype 0.3.0.2 documentation</title>
<title>macapype.nodes.register &#8212; macapype 0.3.1 documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/bootstrap-sphinx.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/sg_gallery.css" />
Expand Down Expand Up @@ -39,7 +39,7 @@
</button>
<a class="navbar-brand" href="../../../index.html"><span><img src="../../../_static/logo_macapype_0.3.jpg"></span>
Macapype</a>
<span class="navbar-text navbar-version pull-left"><b>0.3.0.2</b></span>
<span class="navbar-text navbar-version pull-left"><b>0.3.1</b></span>
</div>

<div class="collapse navbar-collapse nav-collapse">
Expand Down Expand Up @@ -93,12 +93,6 @@
<li class="toctree-l1"><a class="reference internal" href="../../../params.html">Parameters</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../indiv_params.html">Individual Parameters</a><ul>
<li class="toctree-l2"><a class="reference internal" href="../../../indiv_params.html#adding-indiv">Adding -indiv</a></li>
<li class="toctree-l2"><a class="reference internal" href="../../../indiv_params.html#list-of-indiv-params-recap">List of indiv params (recap):</a><ul>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#data-preparation-ants-ants-t1-spm-spm-t1">Data preparation (ANTS, ANTS_T1, SPM, SPM_T1)</a></li>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#spm-based-pipelines-spm-and-spm-t1">SPM based pipelines (SPM and SPM_T1)</a></li>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#ants-based-pipelines">ANTS based pipelines</a></li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="../../../tutorial.html">Tutorial</a><ul>
Expand Down Expand Up @@ -992,7 +986,7 @@ <h1>Source code for macapype.nodes.register</h1><div class="highlight"><pre>

</p>
<p>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-12.<br/>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-13.<br/>
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 4.3.1.<br/>
</p>
</div>
Expand Down
12 changes: 3 additions & 9 deletions _modules/macapype/nodes/segment.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>macapype.nodes.segment &#8212; macapype 0.3.0.2 documentation</title>
<title>macapype.nodes.segment &#8212; macapype 0.3.1 documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/bootstrap-sphinx.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/sg_gallery.css" />
Expand Down Expand Up @@ -39,7 +39,7 @@
</button>
<a class="navbar-brand" href="../../../index.html"><span><img src="../../../_static/logo_macapype_0.3.jpg"></span>
Macapype</a>
<span class="navbar-text navbar-version pull-left"><b>0.3.0.2</b></span>
<span class="navbar-text navbar-version pull-left"><b>0.3.1</b></span>
</div>

<div class="collapse navbar-collapse nav-collapse">
Expand Down Expand Up @@ -93,12 +93,6 @@
<li class="toctree-l1"><a class="reference internal" href="../../../params.html">Parameters</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../indiv_params.html">Individual Parameters</a><ul>
<li class="toctree-l2"><a class="reference internal" href="../../../indiv_params.html#adding-indiv">Adding -indiv</a></li>
<li class="toctree-l2"><a class="reference internal" href="../../../indiv_params.html#list-of-indiv-params-recap">List of indiv params (recap):</a><ul>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#data-preparation-ants-ants-t1-spm-spm-t1">Data preparation (ANTS, ANTS_T1, SPM, SPM_T1)</a></li>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#spm-based-pipelines-spm-and-spm-t1">SPM based pipelines (SPM and SPM_T1)</a></li>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#ants-based-pipelines">ANTS based pipelines</a></li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="../../../tutorial.html">Tutorial</a><ul>
Expand Down Expand Up @@ -785,7 +779,7 @@ <h1>Source code for macapype.nodes.segment</h1><div class="highlight"><pre>

</p>
<p>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-12.<br/>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-13.<br/>
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 4.3.1.<br/>
</p>
</div>
Expand Down
12 changes: 3 additions & 9 deletions _modules/macapype/nodes/surface.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>macapype.nodes.surface &#8212; macapype 0.3.0.2 documentation</title>
<title>macapype.nodes.surface &#8212; macapype 0.3.1 documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/bootstrap-sphinx.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/sg_gallery.css" />
Expand Down Expand Up @@ -39,7 +39,7 @@
</button>
<a class="navbar-brand" href="../../../index.html"><span><img src="../../../_static/logo_macapype_0.3.jpg"></span>
Macapype</a>
<span class="navbar-text navbar-version pull-left"><b>0.3.0.2</b></span>
<span class="navbar-text navbar-version pull-left"><b>0.3.1</b></span>
</div>

<div class="collapse navbar-collapse nav-collapse">
Expand Down Expand Up @@ -93,12 +93,6 @@
<li class="toctree-l1"><a class="reference internal" href="../../../params.html">Parameters</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../indiv_params.html">Individual Parameters</a><ul>
<li class="toctree-l2"><a class="reference internal" href="../../../indiv_params.html#adding-indiv">Adding -indiv</a></li>
<li class="toctree-l2"><a class="reference internal" href="../../../indiv_params.html#list-of-indiv-params-recap">List of indiv params (recap):</a><ul>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#data-preparation-ants-ants-t1-spm-spm-t1">Data preparation (ANTS, ANTS_T1, SPM, SPM_T1)</a></li>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#spm-based-pipelines-spm-and-spm-t1">SPM based pipelines (SPM and SPM_T1)</a></li>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#ants-based-pipelines">ANTS based pipelines</a></li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="../../../tutorial.html">Tutorial</a><ul>
Expand Down Expand Up @@ -417,7 +411,7 @@ <h1>Source code for macapype.nodes.surface</h1><div class="highlight"><pre>

</p>
<p>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-12.<br/>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-13.<br/>
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 4.3.1.<br/>
</p>
</div>
Expand Down
12 changes: 3 additions & 9 deletions _modules/macapype/pipelines/correct_bias.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>macapype.pipelines.correct_bias &#8212; macapype 0.3.0.2 documentation</title>
<title>macapype.pipelines.correct_bias &#8212; macapype 0.3.1 documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/bootstrap-sphinx.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/sg_gallery.css" />
Expand Down Expand Up @@ -39,7 +39,7 @@
</button>
<a class="navbar-brand" href="../../../index.html"><span><img src="../../../_static/logo_macapype_0.3.jpg"></span>
Macapype</a>
<span class="navbar-text navbar-version pull-left"><b>0.3.0.2</b></span>
<span class="navbar-text navbar-version pull-left"><b>0.3.1</b></span>
</div>

<div class="collapse navbar-collapse nav-collapse">
Expand Down Expand Up @@ -93,12 +93,6 @@
<li class="toctree-l1"><a class="reference internal" href="../../../params.html">Parameters</a></li>
<li class="toctree-l1"><a class="reference internal" href="../../../indiv_params.html">Individual Parameters</a><ul>
<li class="toctree-l2"><a class="reference internal" href="../../../indiv_params.html#adding-indiv">Adding -indiv</a></li>
<li class="toctree-l2"><a class="reference internal" href="../../../indiv_params.html#list-of-indiv-params-recap">List of indiv params (recap):</a><ul>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#data-preparation-ants-ants-t1-spm-spm-t1">Data preparation (ANTS, ANTS_T1, SPM, SPM_T1)</a></li>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#spm-based-pipelines-spm-and-spm-t1">SPM based pipelines (SPM and SPM_T1)</a></li>
<li class="toctree-l3"><a class="reference internal" href="../../../indiv_params.html#ants-based-pipelines">ANTS based pipelines</a></li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="../../../tutorial.html">Tutorial</a><ul>
Expand Down Expand Up @@ -735,7 +729,7 @@ <h1>Source code for macapype.pipelines.correct_bias</h1><div class="highlight"><

</p>
<p>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-12.<br/>
&copy; Copyright 2022, Macapype Developers (macatools). Last updated on 2022-05-13.<br/>
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 4.3.1.<br/>
</p>
</div>
Expand Down
Loading

0 comments on commit 5708e31

Please sign in to comment.