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Piotr45 committed May 2, 2023
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21 changes: 21 additions & 0 deletions LICENSE
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MIT License

Copyright (c) 2023 Piotr Baryczkowski

Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
in the Software without restriction, including without limitation the rights
to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
copies of the Software, and to permit persons to whom the Software is
furnished to do so, subject to the following conditions:

The above copyright notice and this permission notice shall be included in all
copies or substantial portions of the Software.

THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
SOFTWARE.
88 changes: 86 additions & 2 deletions README.md
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# preprocessor-based-on-neural-networks
CMOS preprocessor design based on neural networks for detecting heart rate.
# Heart rate detection with CMOS preprocessor based on neural network

## Table of Contents

+ [About](#about)
+ [Getting Started](#getting-started)
+ [Prerequisites](#prerequisites)
+ [Installing the requirements](#installing)
+ [Running the code](#running-the-code)
+ [Todo](#todo)
+ [License](#license)

## About

Heart rate detection with neural network-based CMOS preprocessor. It involves developing a heart rate detection model using TinyML techniques on the PhysioNet dataset and parsing it on a CMOS preprocessor written in Spice.

## Getting Started

These instructions will get you a copy of the project up and running on your local machine.

### Prerequisites

Python libraries that you need to use this software:

+ WFDB
+ Tensorflow

CMOS simulation tools, that are required:

+ Eldo
+ EZwave

### Installing

A step by step series of examples that tell you how to get a development env running.

## Running the code

In order to run the code, you will only need to prepare two files, multiplication coefficients grid and model file.

**prepare_dataset_pipeline.py**

```bash
$ python prepare_dataset.py -h
usage: prepare_dataset.py [-h] --ds-dir DS_DIR --output-file OUTPUT_FILE --sample-length SAMPLE_LENGTH --sample-freq SAMPLE_FREQ [--download]

options:
-h, --help show this help message and exit
--ds-dir DS_DIR Directory with ECG data from physionet (default: None)
--output-file OUTPUT_FILE
File in which the dataset will be saved (default: None)
--sample-length SAMPLE_LENGTH
The length of a sample`s window (default: None)
--sample-freq SAMPLE_FREQ
Number of sampled points from a window (default: None)
--download Whether to download database or not (default: False)
```

**parse_model.py**

Now, in order to run the code you can call the parse_model.py directly.

```bash
$ python parse_model.py -h
usage: parse_model.py [-h] --model MODEL --grid GRID
options:
-h, --help show this help message and exit
--model MODEL Path to file, that contains TensorFlow model (default: None)
--grid GRID Path to file, that contains weight grid (default: None)
```

## Authors

+ **Piotr Baryczkowski** - *ANN to CMOS preprocessor parser implementation* - [Piotr45](https://github.com/Piotr45)
+ **Sebastian Szczepaniak** - *Implementation of dataset pipeline and training ANN* - [D3nz13](https://github.com/D3nz13)

See also the list of [contributors](https://github.com/Piotr45/cmos-preprocessor/graphs/contributors) who participated in this project.

## TODO

- [ ] clean parser code

## License

This project is licensed under the MIT License - see the [LICENSE](LICENSE) file for details

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