MaisiVAE: Auto-cast GroupNorm, deprecate norm_float16

Signed-off-by: John Zielke <[email protected]>

monai/apps/generation/maisi/networks/autoencoderkl_maisi.py

@@ -23,6 +23,7 @@
 from monai.networks.blocks.spatialattention import SpatialAttentionBlock
 from monai.networks.nets.autoencoderkl import AEKLResBlock, AutoencoderKL
 from monai.utils.type_conversion import convert_to_tensor
+from monai.utils.deprecate_utils import deprecated_arg
 
 # Set up logging configuration
 logger = logging.getLogger(__name__)
@@ -33,7 +34,7 @@ def _empty_cuda_cache(save_mem: bool) -> None:
         torch.cuda.empty_cache()
     return
 
-
+@deprecated_arg("norm_float16", since="1.5.0", removed="1.7.0")
 class MaisiGroupNorm3D(nn.GroupNorm):
     """
     Custom 3D Group Normalization with optional print_info output.
@@ -43,7 +44,7 @@ class MaisiGroupNorm3D(nn.GroupNorm):
         num_channels: Number of channels for the group norm.
         eps: Epsilon value for numerical stability.
         affine: Whether to use learnable affine parameters, default to `True`.
-        norm_float16: If True, convert output of MaisiGroupNorm3D to float16 format, default to `False`.
+        norm_float16: Deprecated argument.
         print_info: Whether to print information, default to `False`.
         save_mem: Whether to clean CUDA cache in order to save GPU memory, default to `True`.
     """
@@ -59,14 +60,15 @@ def __init__(
         save_mem: bool = True,
     ):
         super().__init__(num_groups, num_channels, eps, affine)
-        self.norm_float16 = norm_float16
         self.print_info = print_info
         self.save_mem = save_mem
 
     def forward(self, input: torch.Tensor) -> torch.Tensor:
         if self.print_info:
             logger.info(f"MaisiGroupNorm3D with input size: {input.size()}")
 
+        target_dtype = input.dtype
+
         if len(input.shape) != 5:
             raise ValueError("Expected a 5D tensor")
 
@@ -75,13 +77,10 @@ def forward(self, input: torch.Tensor) -> torch.Tensor:
 
         inputs = []
         for i in range(input.size(1)):
-            array = input[:, i : i + 1, ...].to(dtype=torch.float32)
+            array = input[:, i : i + 1, ...]
             mean = array.mean([2, 3, 4, 5], keepdim=True)
             std = array.var([2, 3, 4, 5], unbiased=False, keepdim=True).add_(self.eps).sqrt_()
-            if self.norm_float16:
-                inputs.append(((array - mean) / std).to(dtype=torch.float16))
-            else:
-                inputs.append((array - mean) / std)
+            inputs.append(((array - mean) / std).to(dtype=target_dtype))
 
         del input
         _empty_cuda_cache(self.save_mem)
@@ -375,7 +374,7 @@ def forward(self, x: torch.Tensor) -> torch.Tensor:
         x = self.conv(x)
         return x
 
-
+@deprecated_arg("norm_float16", since="1.5.0", removed="1.7.0")
 class MaisiResBlock(nn.Module):
     """
     Residual block consisting of a cascade of 2 convolutions + activation + normalisation block, and a
@@ -417,7 +416,6 @@ def __init__(
             num_channels=in_channels,
             eps=norm_eps,
             affine=True,
-            norm_float16=norm_float16,
             print_info=print_info,
             save_mem=save_mem,
         )
@@ -439,7 +437,6 @@ def __init__(
             num_channels=out_channels,
             eps=norm_eps,
             affine=True,
-            norm_float16=norm_float16,
             print_info=print_info,
             save_mem=save_mem,
         )
@@ -500,7 +497,7 @@ def forward(self, x: torch.Tensor) -> torch.Tensor:
         out_tensor: torch.Tensor = convert_to_tensor(out)
         return out_tensor
 
-
+@deprecated_arg("norm_float16", since="1.5.0", removed="1.7.0")
 class MaisiEncoder(nn.Module):
     """
     Convolutional cascade that downsamples the image into a spatial latent space.
@@ -520,7 +517,7 @@ class MaisiEncoder(nn.Module):
         use_flash_attention: If True, use flash attention for a memory efficient attention mechanism.
         num_splits: Number of splits for the input tensor.
         dim_split: Dimension of splitting for the input tensor.
-        norm_float16: If True, convert output of MaisiGroupNorm3D to float16 format, default to `False`.
+        norm_float16: Deprecated argument.
         print_info: Whether to print information, default to `False`.
         save_mem: Whether to clean CUDA cache in order to save GPU memory, default to `True`.
     """
@@ -591,7 +588,6 @@ def __init__(
                         out_channels=output_channel,
                         num_splits=num_splits,
                         dim_split=dim_split,
-                        norm_float16=norm_float16,
                         print_info=print_info,
                         save_mem=save_mem,
                     )
@@ -660,7 +656,6 @@ def __init__(
                 num_channels=num_channels[-1],
                 eps=norm_eps,
                 affine=True,
-                norm_float16=norm_float16,
                 print_info=print_info,
                 save_mem=save_mem,
             )
@@ -689,7 +684,7 @@ def forward(self, x: torch.Tensor) -> torch.Tensor:
             _empty_cuda_cache(self.save_mem)
         return x
 
-
+@deprecated_arg("norm_float16", since="1.5.0", removed="1.7.0")
 class MaisiDecoder(nn.Module):
     """
     Convolutional cascade upsampling from a spatial latent space into an image space.
@@ -710,7 +705,7 @@ class MaisiDecoder(nn.Module):
         use_convtranspose: If True, use ConvTranspose to upsample feature maps in decoder.
         num_splits: Number of splits for the input tensor.
         dim_split: Dimension of splitting for the input tensor.
-        norm_float16: If True, convert output of MaisiGroupNorm3D to float16 format, default to `False`.
+        norm_float16: Deprecated argument.
         print_info: Whether to print information, default to `False`.
         save_mem: Whether to clean CUDA cache in order to save GPU memory, default to `True`.
     """
@@ -809,7 +804,6 @@ def __init__(
                         out_channels=block_out_ch,
                         num_splits=num_splits,
                         dim_split=dim_split,
-                        norm_float16=norm_float16,
                         print_info=print_info,
                         save_mem=save_mem,
                     )
@@ -848,7 +842,6 @@ def __init__(
                 num_channels=block_in_ch,
                 eps=norm_eps,
                 affine=True,
-                norm_float16=norm_float16,
                 print_info=print_info,
                 save_mem=save_mem,
             )
@@ -878,6 +871,7 @@ def forward(self, x: torch.Tensor) -> torch.Tensor:
         return x
 
 
+@deprecated_arg("norm_float16", since="1.5.0", removed="1.7.0")
 class AutoencoderKlMaisi(AutoencoderKL):
     """
     AutoencoderKL with custom MaisiEncoder and MaisiDecoder.
@@ -901,7 +895,7 @@ class AutoencoderKlMaisi(AutoencoderKL):
         use_convtranspose: If True, use ConvTranspose to upsample feature maps in decoder.
         num_splits: Number of splits for the input tensor.
         dim_split: Dimension of splitting for the input tensor.
-        norm_float16: If True, convert output of MaisiGroupNorm3D to float16 format, default to `False`.
+        norm_float16: Deprecated argument.
         print_info: Whether to print information, default to `False`.
         save_mem: Whether to clean CUDA cache in order to save GPU memory, default to `True`.
     """
@@ -964,7 +958,6 @@ def __init__(
             use_flash_attention=use_flash_attention,
             num_splits=num_splits,
             dim_split=dim_split,
-            norm_float16=norm_float16,
             print_info=print_info,
             save_mem=save_mem,
         )
@@ -985,7 +978,6 @@ def __init__(
             use_convtranspose=use_convtranspose,
             num_splits=num_splits,
             dim_split=dim_split,
-            norm_float16=norm_float16,
             print_info=print_info,
             save_mem=save_mem,
         )

tests/test_autoencoderkl_maisi.py

@@ -75,28 +75,37 @@
 else:
     CASES = CASES_NO_ATTENTION
 
+test_dtypes = [torch.float32, torch.float16]
+if device.type == "cuda":
+    test_dtypes.append(torch.bfloat16)
+
+DTYPE_CASES = []
+for dtype in test_dtypes:
+    for case in CASES:
+        DTYPE_CASES.append(case + [dtype])
+
 
 class TestAutoencoderKlMaisi(unittest.TestCase):
 
-    @parameterized.expand(CASES)
-    def test_shape(self, input_param, input_shape, expected_shape, expected_latent_shape):
-        net = AutoencoderKlMaisi(**input_param).to(device)
+    @parameterized.expand(DTYPE_CASES)
+    def test_shape(self, input_param, input_shape, expected_shape, expected_latent_shape, dtype):
+        net = AutoencoderKlMaisi(**input_param).to(device=device,dtype=dtype)
         with eval_mode(net):
-            result = net.forward(torch.randn(input_shape).to(device))
+            result = net.forward(torch.randn(input_shape).to(device=device,dtype=dtype))
             self.assertEqual(result[0].shape, expected_shape)
             self.assertEqual(result[1].shape, expected_latent_shape)
             self.assertEqual(result[2].shape, expected_latent_shape)
 
-    @parameterized.expand(CASES)
+    @parameterized.expand(DTYPE_CASES)
     @SkipIfBeforePyTorchVersion((1, 11))
     def test_shape_with_convtranspose_and_checkpointing(
-        self, input_param, input_shape, expected_shape, expected_latent_shape
+        self, input_param, input_shape, expected_shape, expected_latent_shape, dtype
     ):
         input_param = input_param.copy()
         input_param.update({"use_checkpointing": True, "use_convtranspose": True})
-        net = AutoencoderKlMaisi(**input_param).to(device)
+        net = AutoencoderKlMaisi(**input_param).to(device=device,dtype=dtype)
         with eval_mode(net):
-            result = net.forward(torch.randn(input_shape).to(device))
+            result = net.forward(torch.randn(input_shape).to(device=device,dtype=dtype))
             self.assertEqual(result[0].shape, expected_shape)
             self.assertEqual(result[1].shape, expected_latent_shape)
             self.assertEqual(result[2].shape, expected_latent_shape)