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Disable reading SIRIUS keyboad question
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sneumann authored Sep 3, 2024
1 parent 3e7bcd5 commit bd1444c
Showing 1 changed file with 6 additions and 0 deletions.
6 changes: 6 additions & 0 deletions R/DataProcessing.R
Original file line number Diff line number Diff line change
Expand Up @@ -196,6 +196,8 @@ readProjectData <- function(fileLines, progress = FALSE)
listMatrixRows <- NULL
listMatrixCols <- NULL

## Disable command line reading of answer
if (FALSE) {
################################################################################
#Start of importing annotation part1 from two
# Display the message and give the user the option to choose whether to upload the annotation file or not.
Expand Down Expand Up @@ -256,6 +258,7 @@ readProjectData <- function(fileLines, progress = FALSE)

#####################################################################################################################################
#end of importing annotation part1 from two
}

listMatrixVals <- NULL

Expand Down Expand Up @@ -314,6 +317,8 @@ readProjectData <- function(fileLines, progress = FALSE)
dataFrameHeader[3, target + 1] <- annotationColumnName
}

## STN: Disabled.
if (FALSE) {
#Start of importing annotation part2 from two
################################################################################
#adding HEX color codes from external annotations to the annotationColorsMapInitValue of dataFrameHeader
Expand All @@ -335,6 +340,7 @@ readProjectData <- function(fileLines, progress = FALSE)
}
################################################################################
#End of importing annotation part2 from two
}

annotationColumnIndex <- which(metaboliteProfileColumnNames == annotationColumnName)
annotationColorsValue <- dataFrameHeader[2, annotationColumnIndex]
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