upgrade dependencies for deployment

materialsproject · Jan 6, 2025 · 4596386 · 4596386
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commit 4596386
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diff --git a/mpcontribs-api/requirements/deployment.txt b/mpcontribs-api/requirements/deployment.txt
@@ -4,7 +4,7 @@
 #
 #    pip-compile --output-file=MPContribs/mpcontribs-api/requirements/deployment.txt MPContribs/mpcontribs-api/setup.py python/requirements.txt
 #
-anyio==4.7.0
+anyio==4.8.0
     # via jupyter-server
 apispec==5.2.2
     # via mpcontribs-api (MPContribs/mpcontribs-api/setup.py)
@@ -28,15 +28,15 @@ attrs==24.3.0
     #   referencing
 beautifulsoup4==4.12.3
     # via nbconvert
-bleach==6.2.0
+bleach[css]==6.2.0
     # via nbconvert
 blinker==1.9.0
     # via mpcontribs-api (MPContribs/mpcontribs-api/setup.py)
 boltons==24.1.0
     # via mpcontribs-api (MPContribs/mpcontribs-api/setup.py)
-boto3==1.35.90
+boto3==1.35.92
     # via flask-mongorest-mpcontribs
-botocore==1.35.90
+botocore==1.35.92
     # via
     #   boto3
     #   s3transfer
@@ -213,7 +213,7 @@ markupsafe==3.0.2
     #   jinja2
     #   nbconvert
     #   werkzeug
-marshmallow==3.23.2
+marshmallow==3.23.3
     # via
     #   flask-marshmallow
     #   marshmallow-mongoengine
@@ -238,7 +238,7 @@ mongoengine==0.29.1
     #   atlasq-tschaume
     #   flask-mongoengine-tschaume
     #   marshmallow-mongoengine
-monty==2024.12.10
+monty==2025.1.3
     # via pymatgen
 more-itertools==10.5.0
     # via mpcontribs-api (MPContribs/mpcontribs-api/setup.py)
@@ -248,7 +248,7 @@ nbclassic==1.1.0
     # via notebook
 nbclient==0.10.2
     # via nbconvert
-nbconvert==7.16.4
+nbconvert==7.16.5
     # via
     #   jupyter-server
     #   notebook
@@ -309,7 +309,7 @@ parso==0.8.4
     # via jedi
 pexpect==4.9.0
     # via ipython
-pillow==11.0.0
+pillow==11.1.0
     # via matplotlib
 pint==0.19.2
     # via mpcontribs-api (MPContribs/mpcontribs-api/setup.py)
@@ -339,7 +339,7 @@ pybtex==0.24.0
     # via pymatgen
 pycparser==2.22
     # via cffi
-pygments==2.18.0
+pygments==2.19.0
     # via
     #   ipython
     #   nbconvert
@@ -351,7 +351,7 @@ pymongo==4.10.1
     #   mongoengine
 pyopenssl==24.3.0
     # via mpcontribs-api (MPContribs/mpcontribs-api/setup.py)
-pyparsing==3.2.0
+pyparsing==3.2.1
     # via matplotlib
 python-dateutil==2.9.0.post0
     # via
@@ -419,15 +419,15 @@ rq==2.1.0
     #   rq-scheduler
 rq-scheduler==0.14.0
     # via flask-rq2
-ruamel-yaml==0.18.6
+ruamel-yaml==0.18.10
     # via
     #   monty
     #   pymatgen
 ruamel-yaml-clib==0.2.12
     # via ruamel-yaml
 s3transfer==0.10.4
     # via boto3
-scipy==1.14.1
+scipy==1.15.0
     # via
     #   -r python/requirements.txt
     #   pymatgen
@@ -469,7 +469,7 @@ terminado==0.18.1
     #   jupyter-server-terminals
     #   notebook
 tinycss2==1.4.0
-    # via nbconvert
+    # via bleach
 tornado==6.4.2
     # via
     #   ipykernel

diff --git a/mpcontribs-client/requirements/deployment.txt b/mpcontribs-client/requirements/deployment.txt
@@ -48,7 +48,7 @@ idna==3.10
     # via
     #   jsonschema
     #   requests
-importlib-resources==6.4.5
+importlib-resources==6.5.2
     # via swagger-spec-validator
 ipython==8.31.0
     # via mpcontribs-client (MPContribs/mpcontribs-client/setup.py)
@@ -82,7 +82,7 @@ matplotlib-inline==0.1.7
     # via ipython
 monotonic==1.6
     # via bravado
-monty==2024.12.10
+monty==2025.1.3
     # via pymatgen
 mpmath==1.3.0
     # via sympy
@@ -118,7 +118,7 @@ parso==0.8.4
     # via jedi
 pexpect==4.9.0
     # via ipython
-pillow==11.0.0
+pillow==11.1.0
     # via matplotlib
 pint==0.19.2
     # via mpcontribs-client (MPContribs/mpcontribs-client/setup.py)
@@ -134,15 +134,15 @@ pure-eval==0.2.3
     # via stack-data
 pybtex==0.24.0
     # via pymatgen
-pygments==2.18.0
+pygments==2.19.0
     # via ipython
 pyisemail==2.0.1
     # via mpcontribs-client (MPContribs/mpcontribs-client/setup.py)
 pymatgen==2024.11.13
     # via mpcontribs-client (MPContribs/mpcontribs-client/setup.py)
 pymongo==4.10.1
     # via mpcontribs-client (MPContribs/mpcontribs-client/setup.py)
-pyparsing==3.2.0
+pyparsing==3.2.1
     # via matplotlib
 python-dateutil==2.9.0.post0
     # via
@@ -181,13 +181,13 @@ rpds-py==0.22.3
     # via
     #   jsonschema
     #   referencing
-ruamel-yaml==0.18.6
+ruamel-yaml==0.18.10
     # via
     #   monty
     #   pymatgen
 ruamel-yaml-clib==0.2.12
     # via ruamel-yaml
-scipy==1.14.1
+scipy==1.15.0
     # via
     #   -r python/requirements.txt
     #   pymatgen

diff --git a/mpcontribs-kernel-gateway/requirements/deployment.txt b/mpcontribs-kernel-gateway/requirements/deployment.txt
@@ -4,7 +4,7 @@
 #
 #    pip-compile --output-file=MPContribs/mpcontribs-kernel-gateway/requirements/deployment.txt MPContribs/mpcontribs-kernel-gateway/requirements.in python/requirements.txt
 #
-anyio==4.7.0
+anyio==4.8.0
     # via jupyter-server
 argon2-cffi==23.1.0
     # via jupyter-server
@@ -20,7 +20,7 @@ attrs==24.3.0
     #   referencing
 beautifulsoup4==4.12.3
     # via nbconvert
-bleach==6.2.0
+bleach[css]==6.2.0
     # via nbconvert
 blinker==1.9.0
     # via -r MPContribs/mpcontribs-kernel-gateway/requirements.in
@@ -83,7 +83,7 @@ idna==3.10
     #   requests
 importlib-metadata==8.5.0
     # via opentelemetry-api
-importlib-resources==6.4.5
+importlib-resources==6.5.2
     # via swagger-spec-validator
 ipykernel==6.29.5
     # via -r MPContribs/mpcontribs-kernel-gateway/requirements.in
@@ -168,7 +168,7 @@ mistune==3.1.0
     # via nbconvert
 monotonic==1.6
     # via bravado
-monty==2024.12.10
+monty==2025.1.3
     # via pymatgen
 mpcontribs-client==5.9.0
     # via -r MPContribs/mpcontribs-kernel-gateway/requirements.in
@@ -180,7 +180,7 @@ msgpack==1.1.0
     #   bravado-core
 nbclient==0.10.2
     # via nbconvert
-nbconvert==7.16.4
+nbconvert==7.16.5
     # via jupyter-server
 nbformat==5.10.4
     # via
@@ -226,7 +226,7 @@ parso==0.8.4
     # via jedi
 pexpect==4.9.0
     # via ipython
-pillow==11.0.0
+pillow==11.1.0
     # via matplotlib
 pint==0.19.2
     # via mpcontribs-client
@@ -256,7 +256,7 @@ pybtex==0.24.0
     # via pymatgen
 pycparser==2.22
     # via cffi
-pygments==2.18.0
+pygments==2.19.0
     # via
     #   ipython
     #   nbconvert
@@ -266,7 +266,7 @@ pymatgen==2024.11.13
     # via mpcontribs-client
 pymongo==4.10.1
     # via mpcontribs-client
-pyparsing==3.2.0
+pyparsing==3.2.1
     # via matplotlib
 python-dateutil==2.9.0.post0
     # via
@@ -320,13 +320,13 @@ rpds-py==0.22.3
     # via
     #   jsonschema
     #   referencing
-ruamel-yaml==0.18.6
+ruamel-yaml==0.18.10
     # via
     #   monty
     #   pymatgen
 ruamel-yaml-clib==0.2.12
     # via ruamel-yaml
-scipy==1.14.1
+scipy==1.15.0
     # via
     #   -r python/requirements.txt
     #   pymatgen
@@ -369,7 +369,7 @@ terminado==0.18.1
     #   jupyter-server
     #   jupyter-server-terminals
 tinycss2==1.4.0
-    # via nbconvert
+    # via bleach
 tornado==6.4.2
     # via
     #   ipykernel

diff --git a/mpcontribs-portal/requirements/deployment.txt b/mpcontribs-portal/requirements/deployment.txt
@@ -16,15 +16,15 @@ attrs==24.3.0
     #   referencing
 beautifulsoup4==4.12.3
     # via nbconvert
-bleach==6.2.0
+bleach[css]==6.2.0
     # via nbconvert
 boltons==24.1.0
     # via
     #   mpcontribs-client
     #   mpcontribs-portal (MPContribs/mpcontribs-portal/setup.py)
-boto3==1.35.90
+boto3==1.35.92
     # via mpcontribs-portal (MPContribs/mpcontribs-portal/setup.py)
-botocore==1.35.90
+botocore==1.35.92
     # via
     #   boto3
     #   s3transfer
@@ -99,7 +99,7 @@ idna==3.10
     #   requests
 importlib-metadata==8.5.0
     # via opentelemetry-api
-importlib-resources==6.4.5
+importlib-resources==6.5.2
     # via swagger-spec-validator
 ipykernel==6.29.5
     # via mpcontribs-portal (MPContribs/mpcontribs-portal/setup.py)
@@ -171,7 +171,7 @@ mistune==3.1.0
     # via nbconvert
 monotonic==1.6
     # via bravado
-monty==2024.12.10
+monty==2025.1.3
     # via
     #   mpcontribs-portal (MPContribs/mpcontribs-portal/setup.py)
     #   pymatgen
@@ -185,7 +185,7 @@ msgpack==1.1.0
     #   bravado-core
 nbclient==0.10.2
     # via nbconvert
-nbconvert==7.16.4
+nbconvert==7.16.5
     # via mpcontribs-portal (MPContribs/mpcontribs-portal/setup.py)
 nbformat==5.10.4
     # via
@@ -229,7 +229,7 @@ parso==0.8.4
     # via jedi
 pexpect==4.9.0
     # via ipython
-pillow==11.0.0
+pillow==11.1.0
     # via matplotlib
 pint==0.19.2
     # via mpcontribs-client
@@ -251,7 +251,7 @@ pure-eval==0.2.3
     # via stack-data
 pybtex==0.24.0
     # via pymatgen
-pygments==2.18.0
+pygments==2.19.0
     # via
     #   ipython
     #   nbconvert
@@ -261,7 +261,7 @@ pymatgen==2024.11.13
     # via mpcontribs-client
 pymongo==4.10.1
     # via mpcontribs-client
-pyparsing==3.2.0
+pyparsing==3.2.1
     # via matplotlib
 python-dateutil==2.9.0.post0
     # via
@@ -309,15 +309,15 @@ rpds-py==0.22.3
     # via
     #   jsonschema
     #   referencing
-ruamel-yaml==0.18.6
+ruamel-yaml==0.18.10
     # via
     #   monty
     #   pymatgen
 ruamel-yaml-clib==0.2.12
     # via ruamel-yaml
 s3transfer==0.10.4
     # via boto3
-scipy==1.14.1
+scipy==1.15.0
     # via
     #   -r python/requirements.txt
     #   mpcontribs-portal (MPContribs/mpcontribs-portal/setup.py)
@@ -357,7 +357,7 @@ tabulate==0.9.0
 tenacity==9.0.0
     # via plotly
 tinycss2==1.4.0
-    # via nbconvert
+    # via bleach
 tornado==6.4.2
     # via
     #   ipykernel