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meyer-lab · Jan 1, 2024 · aec23b7 · aec23b7
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diff --git a/_posts/lit/1999-05-01-FceR-model.md b/_posts/lit/1999-05-01-FceR-model.md
@@ -3,7 +3,7 @@ layout: post
 title:  Quantifying aggregation of IgE-FcϵRI by multivalent antigen
 date:   1999-05-01 00:00:01
 categories: literature
-external-url: http://linkinghub.elsevier.com/retrieve/pii/S0006349599773972
+external-url: https://linkinghub.elsevier.com/retrieve/pii/S0006349599773972
 tags:
 - Fc receptors
 - immunology

diff --git a/_posts/lit/2002-09-01-Biologist-radio.markdown b/_posts/lit/2002-09-01-Biologist-radio.markdown
@@ -3,7 +3,7 @@ layout: post
 title:  Can a biologist fix a radio?—Or, what I learned while studying apoptosis
 date:   2002-09-01 00:00:01
 categories: literature
-external-url: http://www.cell.com/cancer-cell/abstract/S1535-6108(02)00133-2
+external-url: https://www.cell.com/cancer-cell/abstract/S1535-6108(02)00133-2
 tags:
 - systems biology
 - modeling

diff --git a/_posts/lit/2005-01-01-Antedisciplinary-sci.markdown b/_posts/lit/2005-01-01-Antedisciplinary-sci.markdown
@@ -3,7 +3,7 @@ layout: post
 title:  “Antedisciplinary” Science
 date:   2005-01-01 00:00:01
 categories: literature
-external-url: http://dx.plos.org/10.1371/journal.pcbi.0010006
+external-url: https://dx.plos.org/10.1371/journal.pcbi.0010006
 tags:
 - scientific method
 ---
diff --git a/_posts/lit/2007-08-02-Common-effector-processing.markdown b/_posts/lit/2007-08-02-Common-effector-processing.markdown
@@ -3,7 +3,7 @@ layout: post
 title:  Common effector processing mediates cell-specific responses to stimuli
 date:   2007-08-02 00:00:01
 categories: literature
-external-url: http://www.nature.com/nature/journal/v448/n7153/full/nature06001.html
+external-url: https://www.nature.com/nature/journal/v448/n7153/full/nature06001.html
 tags:
 - systems biology
 - modeling

diff --git a/_posts/lit/2007-12-14-TAM-receptors-are-pleitropic.markdown b/_posts/lit/2007-12-14-TAM-receptors-are-pleitropic.markdown
@@ -3,7 +3,7 @@ layout: post
 title:  TAM Receptors Are Pleiotropic Inhibitors of the Innate Immune Response
 date:   2007-12-14 00:00:01
 categories: literature
-external-url: http://www.sciencedirect.com/science/article/pii/S0092867407013529
+external-url: https://www.sciencedirect.com/science/article/pii/S0092867407013529
 tags:
 - TAM
 - RTKs

diff --git a/_posts/lit/2011-09-02-Rapid-phospho-turnover.markdown b/_posts/lit/2011-09-02-Rapid-phospho-turnover.markdown
@@ -3,7 +3,7 @@ layout: post
 title:  Rapid Phospho-Turnover by Receptor Tyrosine Kinases Impacts Downstream Signaling and Drug Binding
 date:   2011-09-02 00:00:01
 categories: literature
-external-url: http://www.sciencedirect.com/science/article/pii/S1097276511005387
+external-url: https://www.sciencedirect.com/science/article/pii/S1097276511005387
 tags:
 - systems biology
 - modeling

diff --git a/_posts/lit/2012-07-26-Widespread-potential-lit.markdown b/_posts/lit/2012-07-26-Widespread-potential-lit.markdown
@@ -3,7 +3,7 @@ layout: post
 title:  Widespread potential for growth-factor-driven resistance to anticancer kinase inhibitors
 date:   2012-07-26 00:00:01
 categories: literature
-external-url: http://www.nature.com/nature/journal/v487/n7408/full/nature11249.html
+external-url: https://www.nature.com/nature/journal/v487/n7408/full/nature11249.html
 tags:
 - resistance
 - RTKs

diff --git a/_posts/lit/2013-10-24-Reproducible-comp-research.markdown b/_posts/lit/2013-10-24-Reproducible-comp-research.markdown
@@ -3,7 +3,7 @@ layout: post
 title:  Ten Simple Rules for Reproducible Computational Research
 date:   2013-10-24 00:00:01
 categories: literature
-external-url: http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1003285
+external-url: https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1003285
 tags:
 - computation
 - reproducibility

diff --git a/_posts/lit/2014-07-01-coumadin.markdown b/_posts/lit/2014-07-01-coumadin.markdown
@@ -12,11 +12,11 @@ tags:
 
 We frequently are asked about the use of warfarin in cancer patients and whether it is linked to survival. This is a list of a few studies found in the literature.
 
-- Akl, E. A., Kahale, L., Terrenato, I., Neumann, I., Yosuico, V. E. D., Barba, M., et al. (2014). [Oral anticoagulation in patients with cancer who have no therapeutic or prophylactic indication for anticoagulation.](http://doi.org/10.1002/14651858.CD006466.pub5) The Cochrane Database of Systematic Reviews, 7(7), CD006466.
-- Tagalakis, V., Tamim, H., Blostein, M., Hanley, J. A., & Kahn, S. R. (2013). [Risk of prostate cancer death in long-term users of warfarin: a population-based case–control study.](http://doi.org/10.1007/s10552-013-0185-1) Cancer Causes & Control, 24(6), 1079–1085.
-- Pengo, V., Noventa, F., Denas, G., Pengo, M. F., Gallo, U., Grion, A. M., et al. (2011). [Long-term use of vitamin K antagonists and incidence of cancer: a population-based study.](http://doi.org/10.1182/blood-2010-08-304758) Blood, 117(5), 1707–1709.
-- Pottegård, A., Friis, S., & Hallas, J. (2012). [Cancer risk in long-term users of vitamin K antagonists: A population-based case-control study.](http://doi.org/10.1002/ijc.27905) International Journal of Cancer. Journal International Du Cancer, 132(11), 2606–2612.
+- Akl, E. A., Kahale, L., Terrenato, I., Neumann, I., Yosuico, V. E. D., Barba, M., et al. (2014). [Oral anticoagulation in patients with cancer who have no therapeutic or prophylactic indication for anticoagulation.](https://doi.org/10.1002/14651858.CD006466.pub5) The Cochrane Database of Systematic Reviews, 7(7), CD006466.
+- Tagalakis, V., Tamim, H., Blostein, M., Hanley, J. A., & Kahn, S. R. (2013). [Risk of prostate cancer death in long-term users of warfarin: a population-based case–control study.](https://doi.org/10.1007/s10552-013-0185-1) Cancer Causes & Control, 24(6), 1079–1085.
+- Pengo, V., Noventa, F., Denas, G., Pengo, M. F., Gallo, U., Grion, A. M., et al. (2011). [Long-term use of vitamin K antagonists and incidence of cancer: a population-based study.](https://doi.org/10.1182/blood-2010-08-304758) Blood, 117(5), 1707–1709.
+- Pottegård, A., Friis, S., & Hallas, J. (2012). [Cancer risk in long-term users of vitamin K antagonists: A population-based case-control study.](https://doi.org/10.1002/ijc.27905) International Journal of Cancer. Journal International Du Cancer, 132(11), 2606–2612.
 - Chahinian, A. P., Propert, K. J., Ware, J. H., Zimmer, B., Perry, M. C., Hirsh, V., et al. (1989). A randomized trial of anticoagulation with warfarin and of alternating chemotherapy in extensive small-cell lung cancer by the Cancer and Leukemia Group B. Journal of Clinical Oncology, 7(8), 993–1002.
 - Zacharski, L. R., Henderson, W. G., Rickles, F. R., Forman, W. B., Cornell, C. J., Forcier, R. J., et al. (1984). Effect of warfarin anticoagulation on survival in carcinoma of the lung, colon, head and neck, and prostate. Final report of VA Cooperative Study #75. Cancer, 53(10), 2046–2052.
-- Schulman, S., & Lindmarker, P. (2000). [Incidence of cancer after prophylaxis with warfarin against recurrent venous thromboembolism.](http://doi.org/10.1056/NEJM200006293422604) Duration of Anticoagulation Trial. The New England Journal of Medicine, 342(26), 1953–1958.
+- Schulman, S., & Lindmarker, P. (2000). [Incidence of cancer after prophylaxis with warfarin against recurrent venous thromboembolism.](https://doi.org/10.1056/NEJM200006293422604) Duration of Anticoagulation Trial. The New England Journal of Medicine, 342(26), 1953–1958.
 - Zacharski, L. R., & Henderson, W. G. (1990). Warfarin for small-cell lung cancer: why not? Journal of Clinical Oncology, 8(7), 1282–1283.
diff --git a/_posts/lit/2014-09-11-ten-rules-for-better-figures.markdown b/_posts/lit/2014-09-11-ten-rules-for-better-figures.markdown
@@ -3,7 +3,7 @@ layout: post
 title:  Ten Simple Rules for Better Figures
 date:   2014-09-11 00:00:01
 categories: literature
-external-url: http://dx.plos.org/10.1371/journal.pcbi.1003833
+external-url: https://dx.plos.org/10.1371/journal.pcbi.1003833
 tags:
 - presentation
 - scientific method

diff --git a/_posts/lit/2016-11-24-efferocytosis-reprogramming.markdown b/_posts/lit/2016-11-24-efferocytosis-reprogramming.markdown
@@ -3,7 +3,7 @@ layout: post
 title:  Different tissue phagocytes sample apoptotic cells to direct distinct homeostasis programs
 date:   2016-11-24 00:00:01
 categories: literature
-external-url: http://www.nature.com/nature/journal/v539/n7630/full/nature20138.html
+external-url: https://www.nature.com/nature/journal/v539/n7630/full/nature20138.html
 tags:
 - efferocytosis
 - immunology

diff --git a/_posts/lit/2016-11-24-redirecting-efferocytosis.markdown b/_posts/lit/2016-11-24-redirecting-efferocytosis.markdown
@@ -3,7 +3,7 @@ layout: post
 title:  Macrophages redirect phagocytosis by non-professional phagocytes and influence inflammation
 date:   2016-11-24 00:00:01
 categories: literature
-external-url: http://dx.doi.org/10.1038/nature20141
+external-url: https://dx.doi.org/10.1038/nature20141
 tags:
 - RTKs
 - efferocytosis

diff --git a/_posts/lit/2016-12-23-AXL-MHC.markdown b/_posts/lit/2016-12-23-AXL-MHC.markdown
@@ -3,7 +3,7 @@ layout: post
 title:  Reprogramming the immunological microenvironment through radiation and targeting Axl
 date:   2016-12-23 00:00:01
 categories: literature
-external-url: http://www.nature.com/articles/ncomms13898
+external-url: https://www.nature.com/articles/ncomms13898
 tags:
 - immunoncology
 - TAM

diff --git a/_posts/lit/2017-02-24-resistance-tolerance.markdown b/_posts/lit/2017-02-24-resistance-tolerance.markdown
@@ -3,7 +3,7 @@ layout: post
 title:  Antibiotic tolerance facilitates the evolution of resistance
 date:   2017-02-24 00:00:01
 categories: literature
-external-url: http://science.sciencemag.org/content/355/6327/826
+external-url: https://science.sciencemag.org/content/355/6327/826
 tags:
 - resistance
 - tolerance

diff --git a/_posts/news/2014-09-10-EIA-news.markdown b/_posts/news/2014-09-10-EIA-news.markdown
@@ -5,5 +5,5 @@ date:   2014-09-10 00:00:00
 categories: news
 ---
 
-Aaron has received the [Early Independence Award](http://commonfund.nih.gov/earlyindependence/index), a funding mechanism through the NIH Common Fund to allow recent doctoral graduates to rapidly transition to independent research careers.
+Aaron has received the [Early Independence Award](https://commonfund.nih.gov/earlyindependence/index), a funding mechanism through the NIH Common Fund to allow recent doctoral graduates to rapidly transition to independent research careers.
 
diff --git a/_posts/news/2014-10-29-Collins-blog.markdown b/_posts/news/2014-10-29-Collins-blog.markdown
@@ -5,5 +5,5 @@ date:   2014-10-29 00:00:00
 categories: news
 ---
 
-Research from the Meyer lab has been highlighed on [NIH Director Collin's blog](http://directorsblog.nih.gov/2014/10/28/creative-minds-tackling-chemotherapy-resistance/).
+Research from the Meyer lab has been highlighed on [NIH Director Collin's blog](https://directorsblog.nih.gov/2014/10/28/creative-minds-tackling-chemotherapy-resistance/).
 
diff --git a/_posts/news/2016-07-01-Manole-etal.markdown b/_posts/news/2016-07-01-Manole-etal.markdown
@@ -5,4 +5,4 @@ date:   2016-07-01 00:00:01
 categories: news
 ---
 
-Work from the lab is now out in [Cancer Research](http://cancerres.aacrjournals.org/content/early/2016/07/22/0008-5472.CAN-16-0123.long).
+Work from the lab is now out in [Cancer Research](https://cancerres.aacrjournals.org/content/early/2016/07/22/0008-5472.CAN-16-0123.long).