Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

type 3 mucosal glia #2948

Open
wants to merge 6 commits into
base: master
Choose a base branch
from
Open

type 3 mucosal glia #2948

Changes from all commits
Commits
Show all changes
6 commits
Select commit Hold shift + click to select a range
97ba1aa
def and refs
JABelfiore Feb 11, 2025
81c2635
doi to PMID
JABelfiore Feb 11, 2025
03deca1
Merge branch 'master' into 2889-ntr-type-3-mucosal-glia
JABelfiore Feb 11, 2025
43e8b2a
second sentence removed
JABelfiore Feb 18, 2025
4f8d67e
Merge branch 'master' into 2889-ntr-type-3-mucosal-glia
JABelfiore Feb 18, 2025
850d9cb
Merge branch '2889-ntr-type-3-mucosal-glia' of https://github.com/obo…
JABelfiore Feb 18, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
12 changes: 11 additions & 1 deletion src/ontology/cl-edit.owl
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3117,6 +3117,7 @@ Declaration(Class(obo:CL_4047035))
Declaration(Class(obo:CL_4047037))
Declaration(Class(obo:CL_4047040))
Declaration(Class(obo:CL_4047043))
Declaration(Class(obo:CL_4047045))
Declaration(Class(obo:CL_4047051))
Declaration(Class(obo:CL_4047052))
Declaration(Class(obo:CL_4047101))
Expand Down Expand Up @@ -33175,14 +33176,23 @@ SubClassOf(obo:CL_4047040 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_001236

# Class: obo:CL_4047043 (type 1 submucosal plexus glia)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "DOI:10.3389/fncel.2023.1170309") Annotation(oboInOwl:hasDbXref "PMID:28487635") Annotation(oboInOwl:hasDbXref "PMID:33731961") obo:IAO_0000115 obo:CL_4047043 "An enteric glial cell that is associated with neuron cell bodies within submucosal ganglia of the gastrointestinal tract. This cell is located in the submucosa, a layer of connective tissue beneath the intestinal mucosa. This cell plays a role in modulating secretomotor neuron activity and contributes to the regulation of digestive fluid secretion and absorption.")
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "DOI:10.3389/fncel.2023.1170309") Annotation(oboInOwl:hasDbXref "PMID:28487635") Annotation(oboInOwl:hasDbXref "PMID:33731961") obo:IAO_0000115 obo:CL_4047043 "An enteric glial cell that is associated with neuron cell bodies within submucosal ganglia of the gastrointestinal tract. This cell plays a role in modulating secretomotor neuron activity and contributes to the regulation of digestive fluid secretion and absorption.")
AnnotationAssertion(terms:contributor obo:CL_4047043 <https://orcid.org/0009-0005-7919-4905>)
AnnotationAssertion(terms:date obo:CL_4047043 "2025-02-10T17:02:28Z"^^xsd:dateTime)
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:33731961") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_4047043 "type I SMP")
AnnotationAssertion(rdfs:label obo:CL_4047043 "type 1 submucosal plexus glia")
SubClassOf(obo:CL_4047043 obo:CL_4040002)
SubClassOf(obo:CL_4047043 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0009566))

# Class: obo:CL_4047045 (type 3 mucosal glia)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:25161129") Annotation(oboInOwl:hasDbXref "PMID:33731961") Annotation(oboInOwl:hasDbXref "PMID:37153631") Annotation(oboInOwl:hasDbXref "PMID:38957473") obo:IAO_0000115 obo:CL_4047045 "An enteric glial cell located in the lamina propria of the intestinal mucosa. This cell typically has four major processes and is positioned in close proximity to the intestinal epithelium. This cell plays important roles in maintaining gut barrier function, regulating intestinal homeostasis, and mediating interactions between the enteric nervous system and the immune system.")
AnnotationAssertion(terms:contributor obo:CL_4047045 <https://orcid.org/0009-0005-7919-4905>)
Copy link
Collaborator

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

I think the second sentence is appliable to all enteroglial cells.

AnnotationAssertion(terms:date obo:CL_4047045 "2025-02-11T12:39:11Z"^^xsd:dateTime)
AnnotationAssertion(rdfs:label obo:CL_4047045 "type 3 mucosal glia")
SubClassOf(obo:CL_4047045 obo:CL_4040002)
SubClassOf(obo:CL_4047045 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0000030))

# Class: obo:CL_4047051 (small intestine BEST4+ enterocyte)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:24223998") Annotation(oboInOwl:hasDbXref "PMID:34497389") obo:IAO_0000115 obo:CL_4047051 "An enterocyte of the human small intestine expressing bestrophin-4 (BEST4) calcium-activated ion channels. These enterocytes have a disinctive transcriptomic profile and are scattered through the small intestine epithelium.")
Expand Down