Fixes #2957 NTR-tuft cell of auditory tube

[Caroline-99]

Fixes #2957
NTR-tuft cell of auditory tube

[Caroline-99]

#gogoeditdiff

[github-actions]

Here's a diff of how these changes impact the classified ontology (on -base file):

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2025-02-12/cl-base.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-base-master.owl/cl-base.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2025-02-12/cl-base.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-base-pr.owl/cl-base.owl

Ontology imports

Ontology annotations

UBERON_0010062 http://purl.obolibrary.org/obo/UBERON_0010062

Added

• Class: UBERON_0010062

obsolete neuronal brush cell http://purl.obolibrary.org/obo/CL_0000555

Removed

• obsolete neuronal brush cell comment "[Obsolete] neuronal brush cell #2634"

tuft cell of auditory tube http://purl.obolibrary.org/obo/CL_4052041

Added

• tuft cell of auditory tube IAO_0000115 "A tuft cell that is part of the epithelium of the pharyngotympanic (auditory) tube. This chemosensory cell is often positioned near cholinoreceptive sensory nerve fibers, suggesting a role in neuroimmune communication. It detects chemical signals and releases neuropeptides, such as acetylcholine (ACh) and CGRP, which contribute to inflammatory responses that help protect deeper tissues from harmful substances."

  • hasDbXref "PMID:30379593"

  • hasDbXref "PMID:32733896"

• tuft cell of auditory tube label "tuft cell of auditory tube"

• tuft cell of auditory tube date "2025-02-12T12:00:10Z"^^dateTime

• tuft cell of auditory tube contributor 0009-0000-8480-9277

• Class: tuft cell of auditory tube

• tuft cell of auditory tube EquivalentTo brush cell and (BFO_0000050 some UBERON_0010062)

• tuft cell of auditory tube SubClassOf BFO_0000050 some UBERON_0010062

• tuft cell of auditory tube SubClassOf brush cell

• tuft cell of auditory tube SubClassOf auditory epithelial cell

[github-actions]

Here's a diff of your edit file (unreasoned)

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/master/src/ontology/cl-edit.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/branch/src/ontology/cl-edit.owl

Ontology imports

Ontology annotations

pharyngotympanic tube epithelium http://purl.obolibrary.org/obo/UBERON_0010062

Added

• Class: pharyngotympanic tube epithelium

tuft cell of auditory tube http://purl.obolibrary.org/obo/CL_4052041

Added

• tuft cell of auditory tube definition "A tuft cell that is part of the epithelium of the pharyngotympanic (auditory) tube. This chemosensory cell is often positioned near cholinoreceptive sensory nerve fibers, suggesting a role in neuroimmune communication. It detects chemical signals and releases neuropeptides, such as acetylcholine (ACh) and CGRP, which contribute to inflammatory responses that help protect deeper tissues from harmful substances."

  • has cross-reference "PMID:30379593"

  • has cross-reference "PMID:32733896"

• tuft cell of auditory tube label "tuft cell of auditory tube"

• tuft cell of auditory tube date "2025-02-12T12:00:10Z"^^dateTime

• tuft cell of auditory tube contributor 0009-0000-8480-9277

• Class: tuft cell of auditory tube

• tuft cell of auditory tube EquivalentTo brush cell and (part of some pharyngotympanic tube epithelium)

• tuft cell of auditory tube SubClassOf auditory epithelial cell