v22.08.00
🚨 Breaking Changes
🐛 Bug Fixes
- create SimilarityTransform using CuPy 9.x-compatible indexing (#365) @grlee77
- Add
__init__.py
incucim.core
(#359) @jakirkham - Stain extraction: use a less strict condition across channels when thresholding (#316) @grlee77
- Incorporate bug fixes from skimage 0.19.3 (#312) @grlee77
- fix RawKernel bug for canny filter when quantiles are used (#310) @grlee77
📖 Documentation
- Defer loading of
custom.js
(#383) @galipremsagar - add cucim.core.morphology to API docs + other docstring fixes (#367) @grlee77
- Update README.md (#361) @HesAnEasyCoder
- remove unimplemented functions from See Also and fix version numbers in deprecation warnings (#356) @grlee77
- Forward-merge branch-22.06 to branch-22.08 (#344) @grlee77
- Update README.md (#315) @HesAnEasyCoder
- Update index.rst (#314) @HesAnEasyCoder
- Update PyPI package documentation for v22.06.00 (#311) @gigony
🚀 New Features
- Add segmentation with the Chan-Vese active contours method (#343) @grlee77
- Add cucim.skimage.morphology.medial_axis (#342) @grlee77
- Add cucim.skimage.segmentation.expand_labels (#341) @grlee77
- Add Euclidean distance transform for images/volumes (#318) @grlee77
🛠️ Improvements
- Revert "Allow CuPy 11" (#362) @galipremsagar
- Fix issues with day & night modes in python docs (#360) @galipremsagar
- Allow CuPy 11 (#357) @jakirkham
- more efficient separable convolution (#355) @grlee77
- Support resolution and spacing metadata (#349) @gigony
- Performance optimizations to morphological segmentation functions (#340) @grlee77
- benchmarks: avoid use of deprecated pandas API (#339) @grlee77
- Reduce memory overhead and improve performance of normalize_colors_pca (#328) @grlee77
- Protect against obscure divide by zero error in edge case of
normalize_colors_pca
(#327) @grlee77 - complete parametrization of cucim.skimage benchmarks (#324) @grlee77
- parameterization of
filters
andfeatures
benchmarks (v2) (#322) @grlee77 - Add a fast histogram-based median filter (#317) @grlee77
- Remove custom compiler environment variables (#307) @ajschmidt8