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Reformat long pytest line
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tomwhite committed Feb 10, 2025
1 parent 65f9927 commit 2c7abe4
Showing 1 changed file with 9 additions and 1 deletion.
10 changes: 9 additions & 1 deletion .github/workflows/cubed.yml
Original file line number Diff line number Diff line change
Expand Up @@ -30,4 +30,12 @@ jobs:
- name: Test with pytest
run: |
pytest -v sgkit/tests/test_{aggregation,association,hwe,pca}.py -k 'test_count_call_alleles or test_gwas_linear_regression or test_hwep or test_sample_stats or (test_count_variant_alleles and not test_count_variant_alleles__chunked[call_genotype]) or (test_variant_stats and not test_variant_stats__chunks[chunks2-False]) or (test_pca__array_backend and tsqr)' --use-cubed
pytest -v sgkit/tests/test_{aggregation,association,hwe,pca}.py \
-k "test_count_call_alleles or \
test_gwas_linear_regression or \
test_hwep or \
test_sample_stats or \
(test_count_variant_alleles and not test_count_variant_alleles__chunked[call_genotype]) or \
(test_variant_stats and not test_variant_stats__chunks[chunks2-False]) or \
(test_pca__array_backend and tsqr)" or \
--use-cubed

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