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Bio-informatics toolkit #17

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merged 4 commits into from
Dec 10, 2024
Merged

Bio-informatics toolkit #17

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f876206
version bump
zachcp Dec 10, 2024
c8e3ad5
bump deps
zachcp Dec 10, 2024
09760f5
readme
zachcp Dec 10, 2024
45ca3c5
version bump
zachcp Dec 10, 2024
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18 changes: 0 additions & 18 deletions README.md
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Expand Up @@ -8,28 +8,10 @@ RUST-backed utilities for bioinformatic data processing. Rust on the backend wit
## Develop

```sh
# assuming quarto and cargo are installed and on your path.
git clone https://github.com/zachcp/bioinformaticstoolkit.git

cd bioinformaticstoolkit

# install the tauri cli
cargo install tauri-cli

# add cargo bind dir to the path
export PATH=$PATH:~/.cargo/bin/

# to develop
npm run tauri dev

# to package. this build is ~8MB.
npm run tauri build

# to test
cd src-tauri && cargo test
# or verbose
cd src-tauri && cargo test -- --nocapture

```

### Screenshots
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14 changes: 7 additions & 7 deletions package.json
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Expand Up @@ -7,22 +7,22 @@
"dev": "observable preview",
"deploy": "observable deploy",
"observable": "observable",
"tauri": "tauri"
"tauri": "tauri dev"
},
"dependencies": {
"@observablehq/framework": "^1.12.0",
"@observablehq/framework": "^1.13.0",
"@tauri-apps/api": "latest",
"@tauri-apps/plugin-dialog": "latest",
"@tauri-apps/plugin-shell": "latest",
"d3-dsv": "^3.0.1",
"d3-time-format": "^4.1.0",
"ideogram": "^1.47",
"igv": "3.0.8",
"react": "^18.3.1",
"react-dom": "^18.3.1"
"ideogram": "^1.49",
"igv": "3.1.1",
"react": "^19.0.0",
"react-dom": "^19.0.0"
},
"devDependencies": {
"@tauri-apps/cli": "^2.0.3",
"@tauri-apps/cli": "^2.1.0",
"typescript": "latest",
"vite": "latest"
},
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