update version news and history

camilogarciabotero · Sep 9, 2022 · b42eebc · b42eebc
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diff --git a/HISTORY.qmd b/HISTORY.qmd
@@ -1,5 +1,20 @@
 # History {.unnumbered}
 
+## Edition 0.0.9
+
+- Starting the Sanger chapter
+
+- More on Seq. analysis
+
+- Keep history on book and add dates
+
+- Change the cover
+
+- Add new parts and chapters outlines (phylogenetics and metagenomics)
+
+- New challenges on seq analysis solved
+
+
 ## Ed. 0.0.8 (2022-08-29)
 
 - New render w/ Quarto 1.1

diff --git a/NEWS.md b/NEWS.md
@@ -6,4 +6,9 @@
 
 - Keep history on book and add dates
 
-- Move citations per chapter (TODO)
+
+- Change the cover
+
+- Add new parts and chapters outlines (phylogenetics and metagenomics)
+
+- New challenges on seq analysis solved
diff --git a/docs/HISTORY.html b/docs/HISTORY.html
@@ -207,7 +207,7 @@ <h1 class="quarto-secondary-nav-title">History</h1>
 </li>
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
-  <a href="./chs-phylogenetics/phylogenomics.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">10</span>&nbsp; <span class="chapter-title">phylogenomics.html</span></a>
+  <a href="./chs-phylogenetics/phylogenomics.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">10</span>&nbsp; <span class="chapter-title">Phylogenomics</span></a>
   </div>
 </li>
       </ul>
@@ -239,37 +239,57 @@ <h1 class="quarto-secondary-nav-title">History</h1>
   <div class="sidebar-item-container"> 
   <a href="./chs-genomics/functional-genomics.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Functional genomics</span></a>
   </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="./chs-genomics/comparative-genomics.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">15</span>&nbsp; <span class="chapter-title">Comparative genomics</span></a>
+  </div>
 </li>
       </ul>
   </li>
         <li class="sidebar-item sidebar-item-section">
       <div class="sidebar-item-container"> 
-            <a class="sidebar-item-text sidebar-link text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-5" aria-expanded="true">Structural bioinformatics</a>
+            <a class="sidebar-item-text sidebar-link text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-5" aria-expanded="true">Metagenomics</a>
           <a class="sidebar-item-toggle text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-5" aria-expanded="true">
             <i class="bi bi-chevron-right ms-2"></i>
           </a> 
       </div>
       <ul id="quarto-sidebar-section-5" class="collapse list-unstyled sidebar-section depth1 show">  
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
-  <a href="./chs-bio-structural/intro-structural-bioinfo.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">15</span>&nbsp; <span class="chapter-title">Structural bioinformatics</span></a>
+  <a href="./chs-metagenomics/metagenomic-sequencing.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">16</span>&nbsp; <span class="chapter-title">Metagenomic sequencing</span></a>
+  </div>
+</li>
+      </ul>
+  </li>
+        <li class="sidebar-item sidebar-item-section">
+      <div class="sidebar-item-container"> 
+            <a class="sidebar-item-text sidebar-link text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-6" aria-expanded="true">Structural bioinformatics</a>
+          <a class="sidebar-item-toggle text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-6" aria-expanded="true">
+            <i class="bi bi-chevron-right ms-2"></i>
+          </a> 
+      </div>
+      <ul id="quarto-sidebar-section-6" class="collapse list-unstyled sidebar-section depth1 show">  
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="./chs-bio-structural/intro-structural-bioinfo.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">17</span>&nbsp; <span class="chapter-title">Structural bioinformatics</span></a>
   </div>
 </li>
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
-  <a href="./chs-bio-structural/molecular-docking.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">16</span>&nbsp; <span class="chapter-title">Molecular docking</span></a>
+  <a href="./chs-bio-structural/molecular-docking.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">18</span>&nbsp; <span class="chapter-title">Molecular docking</span></a>
   </div>
 </li>
       </ul>
   </li>
         <li class="sidebar-item sidebar-item-section">
       <div class="sidebar-item-container"> 
-            <a class="sidebar-item-text sidebar-link text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-6" aria-expanded="true">Challenges</a>
-          <a class="sidebar-item-toggle text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-6" aria-expanded="true">
+            <a class="sidebar-item-text sidebar-link text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-7" aria-expanded="true">Challenges</a>
+          <a class="sidebar-item-toggle text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-7" aria-expanded="true">
             <i class="bi bi-chevron-right ms-2"></i>
           </a> 
       </div>
-      <ul id="quarto-sidebar-section-6" class="collapse list-unstyled sidebar-section depth1 show">  
+      <ul id="quarto-sidebar-section-7" class="collapse list-unstyled sidebar-section depth1 show">  
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
   <a href="./chs-challenges-demos/unix-challenges.html" class="sidebar-item-text sidebar-link">Unix challenges</a>
@@ -284,12 +304,12 @@ <h1 class="quarto-secondary-nav-title">History</h1>
   </li>
         <li class="sidebar-item sidebar-item-section">
       <div class="sidebar-item-container"> 
-            <a class="sidebar-item-text sidebar-link text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-7" aria-expanded="true">Appendix</a>
-          <a class="sidebar-item-toggle text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-7" aria-expanded="true">
+            <a class="sidebar-item-text sidebar-link text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-8" aria-expanded="true">Appendix</a>
+          <a class="sidebar-item-toggle text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-8" aria-expanded="true">
             <i class="bi bi-chevron-right ms-2"></i>
           </a> 
       </div>
-      <ul id="quarto-sidebar-section-7" class="collapse list-unstyled sidebar-section depth1 show">  
+      <ul id="quarto-sidebar-section-8" class="collapse list-unstyled sidebar-section depth1 show">  
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
   <a href="./HISTORY.html" class="sidebar-item-text sidebar-link active">History</a>