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25 Open 4 Closed
25 Open 4 Closed
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Issues list

fs.pp.construct_flows_from_cellchat error
#29 opened Mar 2, 2025 by xy441
1
cannot access local variable 'ad' where it is not associated with a value
#28 opened Feb 18, 2025 by CollapsarSpectrum
Optimizing NSF Calculation & Customizing GEMs for large data
#27 opened Feb 14, 2025 by Irrationall
Is it seasonable to not filter genes by qval_threshold 0.05 in fs.pp.determine_informative_variables) but remove insignificant genes after fs.tl.learn_intercellular_flows()？
#26 opened Feb 13, 2025 by RuiyingChenBioinfo
2
Questions about "Construct GEMs"
#25 opened Dec 26, 2024 by wangzlgithub
3
plot_intercellular_flows ERROR：
#24 opened Dec 13, 2024 by capuddddd
2
How to determine the value of the n_gems parameter
#23 opened Dec 4, 2024 by wolfQK
2
fs.pp.construct_gems_using_nmf error
#22 opened Nov 27, 2024 by AllenYGY
2
plot_intercellular_flows ERROR
#21 opened Nov 11, 2024 by wolfQK
2
How should non-model species be analyzed?
#20 opened Nov 6, 2024 by zhangpan-2018
1
How to run fs.pp.construct_flows_from_cellphonedb
#19 opened Nov 1, 2024 by OMIC-coding
2
The truth value of a Series is ambiguous. Use a.empty, a.bool(), a.item(), a.any() or a.all().
#18 opened Oct 15, 2024 by 22219098
7
LinAlgError: SVD did not converge
#17 opened Oct 14, 2024 by jingc128
12
unexpected keyword argument 'validated_adjacency_key'
#16 opened Oct 2, 2024 by ChloeHJ
3
ValueError: operands could not be broadcast together with shapes (5305,10) (18027,) (5305,10)
#15 opened Sep 26, 2024 by wangqihao-code
2
How to explore the result?
#14 opened Sep 22, 2024 by LJZYaaa
5
NumericalDivergenceError of fs.pp.construct_gems_using_nsf function
#13 opened Sep 17, 2024 by DBinary
4
KeyError: (19, 11)" AND AttributeError: module 'flowsig.plotting' has no attribute 'plot_differentially_flowing_signals'"
#11 opened Sep 13, 2024 by YuNong-Qiu
4
How to construct the flow expression matrices?
#10 opened Sep 12, 2024 by yixudong
4
Where is the 'GEM' information used for plotting dot plots and heatmaps stored?
#9 opened Sep 10, 2024 by changqinglu
3
How to plot differentially flowing signals?
#8 opened Sep 9, 2024 by changqinglu
1
input file format
#7 opened Sep 7, 2024 by skytguuu
13
How are unique outflows defined?
#5 opened Sep 5, 2024 by wangtanzhang612
1
How to identify the 'flow_network' in plot_intercellular_flows_from_inflows?
#3 opened Sep 3, 2024 by changqinglu
3
ValueError: too many values to unpack (expected 2)
#1 opened Aug 31, 2024 by OMIC-coding
3
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